| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4105 |
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| Symbol | |
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| ID | 6160063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4610539 |
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| End bp | 4612182 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666883 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001793122 |
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| Protein GI | 171060773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000015602 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGATC CTTCCGCCCC GACCCTTGCC GCCGATGCCC AGCCCGCCGC CGTGCCGCTG
GGTGCGCGGC AACGCGCGCA GCGGTGGTGG CGCCTGGCAG CGGTCACCGT GCTGGGTTTC
GCCTCCGGCC TGCCGCTGGC GCTGACCGGC CAGGCGATGC AGGCCTGGCT GAGCCTGGAC
GGCATCGACG TGGCGACCAT CGGTTTCCTG AGCCTGGTCG GCCTGCCCTA CACCTTCAAG
TTCCTGTGGG CGCCGCTGAT GGACCGTTTC GACCCGCCCG GGCTCGGCCG GCGGCGCGGC
TGGCTGGTGA TCACGCAGCT GCTGCTGGCC GGCGCGCTGC TGGCGATGTC GGCCACGCCG
CCGGCCGGTG CGGTGCAGGT GTTCGCGCTG CTGGCGGTGA CGGTGGCGTT TTTGTCGGCC
TCGCAGGACG TCGTGATCGA CGCCTACCGC ACCGACCTGC TGCCCGCGCA CGAGCGTGGC
CTGGGCTCGT CGCTGTCGGT GCTGGGTTAT CGGCTGGCGA TGATCCTGTC GGGCGGCGTG
GCGATGATCT GGACCGACCC GGGCAACGCC GCCGCCGCTG CAGGTGGCAC ATCCTGGGAC
TGGCCGGCGG TCTACCGCCT GATGGCCGCG CTGATGGTCG GCGCGGCGGC GCTGTCGGCG
CTGGCGCTGC CGCGGCTGCA CACGCTGCCG GCGCCGACCA GCGTGGCGCG CCACGACCTG
CTCGGTTTTG CGGCGGTGTT CGCGGCGGTG GCGCTCGGTT ATGTCGTCAC CCACCAGCTG
CTCAACCCGC TGGCCGGCTG GCTGCTGGGC TCGGCGATGT CGGGCACGTC GCTCGCGCCG
GCGCTGCAGC AGCGCTGGAT CGACCTGGCC GCGCTGCTGC TGGGCATCGG TTTCACGCTG
CCGCTGGCAG CCTGGGCGGC GCGCGCGGCC CGGTTCGAGA CCCTGCTCGG CGGCCTGGCC
AACTACTTCA GCCAGCCGGG CGCCTGGGGT TTCCTGGCCT TCATCGTGCT CTACAAGCTC
GGCGACGCCT TTGCCGGCTC GCTGATGACG CCCTTTCTGC TCAAGAGCAT GCTCTACAGC
TCGGCCGAGG TCGGCGTGGT CAACAAGGTC ATCGGCCTGT GGCTGACGAT CGGCGGCGCG
CTGCTGGGCG GCGCGCTGAT GCTCAAGCTC GGGCTGTGGC GGGCGCTGTT CGTGTTCGGC
CTGCTGCAGA TGGCGAGCAA CGTCGGTTTC TGGTGGCTGG CGGTCAGCGG CAAGGGCGCG
CTGCCGGGGC TGCTGATGCC GGCGTTCGAC TGGGGTTTTC TCAAGCTGGC GCAGCCGACC
GAGATCGACG GCGGCCTGCT GCTGGTGATC GCCAGCGAGA ACATCTCCAG CGGCATGGGC
ACGGCGGCCT TCGTGGCCTT TCTGATGAGC CTGTGCAACC AGCGCTTCAC GGCCACCCAG
TACGCGATGC TGAGCGCCTT TGCGGCGATC GGCCGGGTCT GGGTCGGGCC GCTGGCGGGC
GTGCTGGCCG AGTCGATCGG CTGGCCGATC TTCTTCATCC TGTCCACGCT CGCCGCCATG
CCGGCGTTGT GGATGCTGTG GGCCATGCGC GAGACCGTGC GCTCGCTCGA CGTCATCGCG
CCGTCCGGGC CGGTCGACGA CTGA
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| Protein sequence | MPDPSAPTLA ADAQPAAVPL GARQRAQRWW RLAAVTVLGF ASGLPLALTG QAMQAWLSLD
GIDVATIGFL SLVGLPYTFK FLWAPLMDRF DPPGLGRRRG WLVITQLLLA GALLAMSATP
PAGAVQVFAL LAVTVAFLSA SQDVVIDAYR TDLLPAHERG LGSSLSVLGY RLAMILSGGV
AMIWTDPGNA AAAAGGTSWD WPAVYRLMAA LMVGAAALSA LALPRLHTLP APTSVARHDL
LGFAAVFAAV ALGYVVTHQL LNPLAGWLLG SAMSGTSLAP ALQQRWIDLA ALLLGIGFTL
PLAAWAARAA RFETLLGGLA NYFSQPGAWG FLAFIVLYKL GDAFAGSLMT PFLLKSMLYS
SAEVGVVNKV IGLWLTIGGA LLGGALMLKL GLWRALFVFG LLQMASNVGF WWLAVSGKGA
LPGLLMPAFD WGFLKLAQPT EIDGGLLLVI ASENISSGMG TAAFVAFLMS LCNQRFTATQ
YAMLSAFAAI GRVWVGPLAG VLAESIGWPI FFILSTLAAM PALWMLWAMR ETVRSLDVIA
PSGPVDD
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