| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3974 |
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| Symbol | |
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| ID | 6161961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4460151 |
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| End bp | 4461464 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666752 |
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| Product | glutamate-1-semialdehyde aminotransferase |
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| Protein accession | YP_001792993 |
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| Protein GI | 171060644 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00403447 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGCGACAC CCGTGAGCAG CAACGCAGAA CTCTTCGAAC GCGCCCAGCG CTCGATCCCC
GGCGGCGTCA ATTCGCCGGT CCGTGCCTTC CGAGCCGTGG GCGGCACGCC GCGTTTCATC
GCGCGCGCCC AGGGCGCCTA CATGTGGGAC GCCGAAGGCA AGCAGTACAT CGACTACATC
GGCTCGTGGG GCCCGATGAT CCTCGGCCAC GGCCACCCGG CCGTGCTCGC GGCGGTGCAG
AAGGCCGCCA CCGAAGGCTT CAGCTTCGGC GCGCCGACCG AGCGTGAGGT CGAGCTCGCC
GAGACCATCC TCGCCCTGGT GCCGAGCTGC GAGCAGATCC GCCTGGTCAG CTCGGGCACC
GAGGCGGCGA TGAGTGCGAT CCGCCTGGCG CGTGGCGCCA CCGGCCGCAG CAAGCTGATC
AAGTTCGAGG GCTGCTATCA CGGCCACGCC GACGCGCTGC TGGTCAAGGC CGGCTCGGGC
CTGGCCACCT TCGGCAACCC GACCTCGGCC GGCGTGCCGC CCGAGGTGGT GCAGCACACG
CTGGTGCTGA CCTACAACGA CATCGAGCAG CTCGAAGAGG CGTTCAAGAT CCACGGCCCC
GAACTCGCCT GCGTGATGAT CGAGCCGATC GCCGGCAACA TGAACTTCGT GCGTGCCACC
GTGCCGTTCA TGAAGCGCAT CCGCGAGCTG TGCACGCAGC ACGGCGCGCT GCTGGTGTTC
GACGAGGTGA TGTGCGGCTT CCGCGTCGCG CTCGGCAGCG CGCAGAGCCT GTATGCGCAG
GCGATCCCCG GCTTCGCGCC CGACGTCAGC GTGTTCGGCA AGGTGATCGG CGGCGGCATG
CCGCTGGCCG CGTTCGGCGC CTCGCGCAAG ATCATGAGCC TGCTGGCGCC ACTCGGCCCG
GTCTATCAGG CCGGCACCTT GAGCGGCAAC CCGGTCGCGA CCGCCTGCGG CCTGGCGACG
CTGCGCGAGA TCAGCCAGCC CGGCTTCTTC GAGGCGCTCG GCGCCAGGAC CCGCCGCCTG
GTCGACGGCC TGAGTGCTGC GGCGGCTGAC GCCGGCGTGC CCTTCGTCGG CGACTGCCAG
GGCGGCATGT TCGGCTTCTT CTTCCCGCGC AACCGCGGCG AAGGCCTGCC GCAGAACTAC
GCCACCGTGA TGGCGACCGA CCAGGCGCGC TTCAACAGCT TCTTCCACGG CCTGCTCGAC
CGCGGCGTCT ACCTCGCGCC GGCGCTCTAC GAAGCCGGCT TCGTCAGCGC CGCCCACAGC
GACGCCGACA TCGACGCGAC CGTCGCTGCC GCGCGCGCCG CCCTGCAGCC CTGA
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| Protein sequence | MATPVSSNAE LFERAQRSIP GGVNSPVRAF RAVGGTPRFI ARAQGAYMWD AEGKQYIDYI
GSWGPMILGH GHPAVLAAVQ KAATEGFSFG APTEREVELA ETILALVPSC EQIRLVSSGT
EAAMSAIRLA RGATGRSKLI KFEGCYHGHA DALLVKAGSG LATFGNPTSA GVPPEVVQHT
LVLTYNDIEQ LEEAFKIHGP ELACVMIEPI AGNMNFVRAT VPFMKRIREL CTQHGALLVF
DEVMCGFRVA LGSAQSLYAQ AIPGFAPDVS VFGKVIGGGM PLAAFGASRK IMSLLAPLGP
VYQAGTLSGN PVATACGLAT LREISQPGFF EALGARTRRL VDGLSAAAAD AGVPFVGDCQ
GGMFGFFFPR NRGEGLPQNY ATVMATDQAR FNSFFHGLLD RGVYLAPALY EAGFVSAAHS
DADIDATVAA ARAALQP
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