Gene Lcho_3883 details

Gene Information

• Locus tag: Lcho_3883
• ID: 6162333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 4356894
• End bp: 4357514
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 641666661
• Product: hypothetical protein
• Protein accession: YP_001792902
• Protein GI: 171060553

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 54
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAGCCG CCCGCCACTG GCGCCCCGCC CTGCTGCTGG CCACGCTGGC CGGCCTGCTG 
GCGCTCGCGG TCGGGGCGCC CAACGCGCCG CCCACCTCCC CGGCGCCGAC ATCGACGACA 
GCGATGACAG CCTCGGCCAC CGCCCCCCGC CTGGTGCCGG CCCGCGCAAC GGCCGCCCGA 
TCAGCCGCCC GGGCCGGCGC ACCGACGCCG GCCGACCCGC CGATCACCGG GCGCGACGCG 
GCGCTGTCGG CGCTCGACAC CGGCCTGGTC GCGCGCCGCA CCGCGGCCGG CGGCAAGGCG 
CCCGATGCGT TTGCCGCGCA CAGCTGGCAT GTCGCGCCAC CGCCCGCGCC ACCGGCGCCG 
GTGGTCTGGC AGCCGCCGCC GCAGCCCGCG CCACCGCAGG CGCCGCCGCT GCCGTTCAAG 
TACCTGGGCC GGATGGAGGA ATCGCCCGAG CGCACCGTCT GGTACCTGCT GCAGGGCGAG 
CGCCTGATCG TGAAGGCCTC CGGCGAGGCG ATCGACAGCA GCTACCGCAT CGACGGCGCC 
GAGGCCGGCC AGCTGCGTTT CACCTACCTG CCGCTCGGCC AGCAGCAGTC CCTGACCCTG 
CCGATCGGAG CCCCCCCGTG A 

 

Protein sequence

MKAARHWRPA LLLATLAGLL ALAVGAPNAP PTSPAPTSTT AMTASATAPR LVPARATAAR 
SAARAGAPTP ADPPITGRDA ALSALDTGLV ARRTAAGGKA PDAFAAHSWH VAPPPAPPAP 
VVWQPPPQPA PPQAPPLPFK YLGRMEESPE RTVWYLLQGE RLIVKASGEA IDSSYRIDGA 
EAGQLRFTYL PLGQQQSLTL PIGAPP