| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3841 |
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| Symbol | |
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| ID | 6161956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4304831 |
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| End bp | 4305667 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666614 |
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| Product | nitrate ABC transporter, ATPase subunits C and D |
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| Protein accession | YP_001792860 |
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| Protein GI | 171060511 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA CAACAGATTC ACGCACCAGC ACGCTGCTGC GCATCGAAAA CGTCGGCATG
ACCTTCCCGA CCAAGTCGGG CCCGTTCGTG GCACTGCGCG ACATCCACCT CAACGTGGCG
CGCGGCGAGT TCATCTCGCT GATCGGCCAC TCGGGCTGCG GCAAGTCGAC CCTGCTGAAC
CTGGTGGCCG GCCTGACCAC GCCCACCAGC GGCGTGATGC TGCTCGAGGA CCGCGAACTG
CGTGGCCCCG GCCCGGACCG CGCGGTGGTG TTCCAGAACC ACTCGCTGCT GCCGTGGATG
AGCTGCCTCG AAAACGTGCA CCTGGCCGTC GAGCGGGTGT TCGGCGCCAC CGAGAAGAAG
GCCCAGCTCA AGGAGCGCGC GATGGCGGCG CTCAAGCTGG TCGGCCTCGA TCACGCCAGC
GAGAAGCGTC CGGGCGAGAT CTCCGGGGGC ATGAAGCAGC GCGTGGGCAT CGCCCGGGCG
CTGGCGATGG AGCCGAAGAT GCTGCTGATG GACGAGCCCT TCGGCGCACT TGATGCGCTG
ACGCGCGCCA AGCTGCAGGA CGAGCTGATG AAGATCGTCG CCGCCACCGG TTCGACGGTG
ATGATGGTCA CGCACGACGT CGACGAGGCC GTGCTGCTGT CCGACCGCAT CGTGATGCTG
ACCAACGGCC CGGCCGCCAC CATCGGCGAG GTGCTGAAGG TGCCGCTGGC GCCGCTGCGC
GAGGCCGCGC GCGCGCGCCT CGAGATGGCG CACGACGCCG ACTACCTGCA CTGCCGGGAG
GCCGTGCTCG AGTTCCTGTA TCACAAGCAG GCGCACGTCG AGCGCGAGGC GGCCTGA
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| Protein sequence | MTQTTDSRTS TLLRIENVGM TFPTKSGPFV ALRDIHLNVA RGEFISLIGH SGCGKSTLLN
LVAGLTTPTS GVMLLEDREL RGPGPDRAVV FQNHSLLPWM SCLENVHLAV ERVFGATEKK
AQLKERAMAA LKLVGLDHAS EKRPGEISGG MKQRVGIARA LAMEPKMLLM DEPFGALDAL
TRAKLQDELM KIVAATGSTV MMVTHDVDEA VLLSDRIVML TNGPAATIGE VLKVPLAPLR
EAARARLEMA HDADYLHCRE AVLEFLYHKQ AHVEREAA
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