Gene Lcho_3822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3822 
Symbol 
ID6160446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4286338 
End bp4286589 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content63% 
IMG OID641666595 
Producthypothetical protein 
Protein accessionYP_001792841 
Protein GI171060492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.289947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGT CCCAGCCACC CGAAACAGAA GGCCTGCGCG ACGCAGCGCA GCGCAAGCTG 
TCGCTGCTGC AGACGATCAA GGCCGTGGCA TGGTCGTTCT TCGGCGTGCG CCGCGGCAGC
GACTACCAGA ACGACGTCAA CAAGCTCAAT CCGGTGCACG TGATCATTGC CGGGCTGATC
GGCGCGGCGC TGTTCATCAT CGCCTTGATC TTGCTGGTGC GCTTGGTCGT GACCAGCGGC
GCAGCCAGCT AG
 
Protein sequence
MSMSQPPETE GLRDAAQRKL SLLQTIKAVA WSFFGVRRGS DYQNDVNKLN PVHVIIAGLI 
GAALFIIALI LLVRLVVTSG AAS