| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3811 |
|---|
| Symbol | |
|---|
| ID | 6160618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 4277298 |
|---|
| End bp | 4277705 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641666584 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001792830 |
|---|
| Protein GI | 171060481 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.155476 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC CAGCCCTTGC CCCGATTGCC CACCCCGACG CCGGCTGGCT CGTCGCCTGC
CTGTGCGCGC GCTGGTGCAA CACCTGCGAG GCCTACCGCG TCACGTTCGC GCAGGTGGCC
GCCCAGTTCC CGGCGCTGCG TTTCGTCTGG GTCGACATCG AGGACGAGGC CGACACGCTC
GGCGACGCCG CGCTCGAGGT CGAGAACTTC CCGACCGTGA TGCTGCTGCA GCACGGCCGG
CCACGCTTCT TCGGCACGCT GCTGCCGCAC GCGAGCACCT TGTCGCGCAC GCTGACCGCC
GCGCTGGCGG GTGAACTCGC CGGCGCCGGC CTGGGGACCA CGGCCGATGC GCTGGCGCCG
GGCGTGCTGC GAGTGGCCGC GCACGACGAG GCGTCGGCCC CGCGCTGA
|
|---|
| Protein sequence | MTAPALAPIA HPDAGWLVAC LCARWCNTCE AYRVTFAQVA AQFPALRFVW VDIEDEADTL
GDAALEVENF PTVMLLQHGR PRFFGTLLPH ASTLSRTLTA ALAGELAGAG LGTTADALAP
GVLRVAAHDE ASAPR
|
|---|
| |