Gene Lcho_3780 details

Gene Information

• Locus tag: Lcho_3780
• ID: 6161911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 4239763
• End bp: 4240572
• Gene Length: 810 bp
• Protein Length: 269 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 641666553
• Product: hypothetical protein
• Protein accession: YP_001792799
• Protein GI: 171060450

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 65
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATGGAT CGTGGATGTC GGGCCTCGTG CTGGGCGCGC TTGCTGCTGC GCTGCCGATG 
GTGTCCGTGG CACAGAAGAC CGCTGCCGAA GGCATTGCCG AATACCGCAA GATGCTCGAG 
GACGGCAATC CGGCCGAGCT GTTCGAAGCC AAGGGCGAAG ACCTCTGGAA GCAGAAACGC 
GGCCCGAAGA ACGCCAGCCT CGAGGCCTGT GATCTCGGCA AGGGCCCGGG TGTCGTCAAG 
GGGGCGTTCG TCGAGCTGCC GCGCTACTTC GCCGATGTCG GCCGGGTCCA GGATCTGGAG 
ACCCGCCTCG TCACCTGCAT GTCGACGCTG CAGGGTTTCG ATGCGGCCGA GATCGCCAAG 
ACGGCGTTCG GGCGTGGCGA GATGGCCAAC GTCACCGCGC TGGCGACCTG GATCGCCGGT 
TCGTCGCGCG ACATGAAGTT CAACCTGCCG CAAGCCCATG CAGAAGAAAC GCGCATGTAC 
GAACTGGGCA AGCGAGCCTT CTTCTACCGC GGCGGCTCGC ATGACTTTTC CTGCGCCACC 
TGCCACAGCA ACGACGGCCA GCGCATCCGC CTGCAGGACC TGCCCAACCT GACCAAGAAC 
CCGGGTGACG GCGTCGGCTT CGCGGCCTGG CCGGCCTACC GCGTCAGCAA CGGCCAGATG 
TGGAGCATGC AGTTGCGCCT GAACGACTGC TTCCGTCAGC AGCGTTTCCC CGAGCCCGGC 
TTCGGCTCCG ACGTGACGAT CGCACTGGCC TCGTACATGG GCGTGAACGC CAAGGGCGCG 
GTCTCGATCG CGCCGGCCAT CAAGCGTTGA 

 

Protein sequence

MNGSWMSGLV LGALAAALPM VSVAQKTAAE GIAEYRKMLE DGNPAELFEA KGEDLWKQKR 
GPKNASLEAC DLGKGPGVVK GAFVELPRYF ADVGRVQDLE TRLVTCMSTL QGFDAAEIAK 
TAFGRGEMAN VTALATWIAG SSRDMKFNLP QAHAEETRMY ELGKRAFFYR GGSHDFSCAT 
CHSNDGQRIR LQDLPNLTKN PGDGVGFAAW PAYRVSNGQM WSMQLRLNDC FRQQRFPEPG 
FGSDVTIALA SYMGVNAKGA VSIAPAIKR