| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3764 |
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| Symbol | |
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| ID | 6162951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4222391 |
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| End bp | 4224028 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641666537 |
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| Product | histidine kinase |
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| Protein accession | YP_001792783 |
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| Protein GI | 171060434 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.285896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA CCTTGTCGAT CGATGGCAGT GCCGCACGGC TCGACCGGGT CGGATCACCG
TGGCTGGCTG CGGGTGTCTG GGCGTCCGGC TGGGTGGCCA TGCTGGCGCT GGACGGCCAC
GTCGACCTCG CCAACCTCGC GATGGTGCTG GTGCTGGCCT CGGCGCTGGC CTCGTTGTGG
CTGCGAGCGT CGGTGGCGGT GCTGGCCGGC GCGGCGGCGG TGCTGGCCTT CAACTTCGCC
TTCGTGCCCC CGCGTGGCCA GTTCACGGTC GACCTGCATC AGCACGCCTT GCTGCTGCTG
GCGATGCTGC TGGTCAACTG GATCGTCGCG GCGCTGATGG TGGCGCTGCG CCAGCAGGCC
CGCCACGCGG GCGAACAGGC CGCGCGCGCC GAACAGCTGC GCCGCCTGGG CGAAACCTTG
CGCGACGCGG TCGATCCGCT GGCCCACGTC AGCGCGTTGG GCGAGGCGAT CCAGGCCACC
GCCCACCGAC CGGCCGCGCT GATGGTGCTG AAGGCGCGCG GCACTGCCAA CGCCGGCCTA
AGCCCGGTCG ATCCGAGCCA GCCGCAGCCG GACGTGCTGC GCTACGGCCG CGTCGACGCC
GATCAGCAGG CCGGCCTCTG GCACTGCCAG CGCCAGGGCC GGGCGATGGG GCCGGGCACC
GGGCTTTTCG AGGATCAGCC CGACTGGTAC CTGCCGCTGC GCGGGCGCGG CATCACGCTG
GGCGCGGCGG TGCTGCGCGG CGATGACGTC GACGCGCCCG TCGACGCCGA CCTGCACGCC
CACCTCCAGG CCCTGTGCGA CCAGATGGGC CTGGCGCTGC AGCGTGCGCT GGCCGAGCGC
GAGGAGCGCG ACGCGCTGGC GCAGGCGCAG ACCCAGGCGG TGCGCAACGC GCTGCTGGCG
GCGATCTCGC ACGACTACCG CACGCCGCTG GCCACCATCA TGAGCGCCGC CTCGTCGCTC
GACGAGCAGG CCGACCGGCT CGCGCCCGCG CAGCGCCAGC GGCTGGCGCA CAGCATCGTC
GACGAGGTGA CGCGCCTGAG CCGCCTGACC GACAACACGC TGCAGCTCGC GCGGCTCGAC
GCGCCGGGCG TGACCCTGCG CTGCGACTGG GAGTCGGCCG AGGAGATCGT CGGCGCCGTG
CTGCGCCACG CCCGCCAGCG CGACCCCGCC CGGCGCGTGC GCGCCCGGCT CGAACCCGGC
CTGCCGCTGC TGTGGTGCGA CGCCATCCTG ATCGCGCAGA TGCTCGACAA CCTGATCGAC
AACGCCCTCA AGTACAGCCC GGCCGAGGCG CCGGTGGAGC TGCTGGTGCA GCGCCGGGTC
GAACACGTGG TGCTGGCGGT GCGCGACCGC GGGCCCGGCA TCGCGCCGGC CTGGCGCAGC
CGGGTGTTCG ACGTCTTTCA CCGTGGCGCC GAGCCGATGG ATGGCGCCGC CTCGCGCAGC
CCGGACATGG CCGCCACCGA TTCGAATCCG GCCCGCGCCC GGCCCGGCGC CGGCGTCGGC
CTGGCGGTCT GCCGCGCGAT CGCCCGCGCC CACGGCGGCG AGCTGCGCCT GCGCGCGCGC
GGCCACGGCG GCTGCAGCTT CGAGTGCGAG CTGCCGCTGC GCACCCCGCC GCCGCCCGCC
GAGGAGCCGT CGTCGTGA
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| Protein sequence | MKQTLSIDGS AARLDRVGSP WLAAGVWASG WVAMLALDGH VDLANLAMVL VLASALASLW
LRASVAVLAG AAAVLAFNFA FVPPRGQFTV DLHQHALLLL AMLLVNWIVA ALMVALRQQA
RHAGEQAARA EQLRRLGETL RDAVDPLAHV SALGEAIQAT AHRPAALMVL KARGTANAGL
SPVDPSQPQP DVLRYGRVDA DQQAGLWHCQ RQGRAMGPGT GLFEDQPDWY LPLRGRGITL
GAAVLRGDDV DAPVDADLHA HLQALCDQMG LALQRALAER EERDALAQAQ TQAVRNALLA
AISHDYRTPL ATIMSAASSL DEQADRLAPA QRQRLAHSIV DEVTRLSRLT DNTLQLARLD
APGVTLRCDW ESAEEIVGAV LRHARQRDPA RRVRARLEPG LPLLWCDAIL IAQMLDNLID
NALKYSPAEA PVELLVQRRV EHVVLAVRDR GPGIAPAWRS RVFDVFHRGA EPMDGAASRS
PDMAATDSNP ARARPGAGVG LAVCRAIARA HGGELRLRAR GHGGCSFECE LPLRTPPPPA
EEPSS
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