Gene Lcho_3731 details

Gene Information

• Locus tag: Lcho_3731
• ID: 6163764
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 4172878
• End bp: 4173507
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641666504
• Product: proline rich protein
• Protein accession: YP_001792750
• Protein GI: 171060401

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 0.655053
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCGACA CCCTCGACAA ACCGGCCGAC GGCGGCGGCT TCTTCTCGCG CTGGTCGCAG 
CGCAAGGTGC AGGCGCGGGT GGGTGCGCCC CTGGCCGAGC CGGTCATGCC GACGACTCCG 
CCGCCCGCGC CACAACCTGC ACCGTCAGCG GTCGACACCC AGCCGGCCGC CCATGTCGCC 
GCCCCCGCCA CGACTGCGGA ATCACCGGCC GCCGAGAAAC CCGCGCCGCC CACGCTCGAC 
GATGTCGCCG CGCTGACACA CGAATCCGAC TACGCCCGCT TCGTCGCCCG TGATGTCGAC 
GCCCCGGTGC GCAACGCGGC GCTCAAGAAA CTGTTCACTG ACCCGCACTT CAACGTGATG 
GACGGCCTGG ACACCTACAT CGACGACTAC GGCATCCCCG ACCCGCTGCC CGAGGGCATG 
CTGCGGCAGA TGGCGCAGTC GCAGTTCCTG GGCCTGTTCC GCGACGAGGA CAAGGCCCGG 
GAAGACGCCC CCGATGCCGG CACGCTGCCG GCGCTCAACG ACGACATCCC GCCCGATGAA 
GACCCTGATC TGCGACTGCA ACCGCACGAT GCCGCTGGAC GGCCCGGCGC TGAACCGGGC 
GCTGGCGAAC TCGCCCAACG CCAGCTCTGA 

 

Protein sequence

MPDTLDKPAD GGGFFSRWSQ RKVQARVGAP LAEPVMPTTP PPAPQPAPSA VDTQPAAHVA 
APATTAESPA AEKPAPPTLD DVAALTHESD YARFVARDVD APVRNAALKK LFTDPHFNVM 
DGLDTYIDDY GIPDPLPEGM LRQMAQSQFL GLFRDEDKAR EDAPDAGTLP ALNDDIPPDE 
DPDLRLQPHD AAGRPGAEPG AGELAQRQL