Gene Lcho_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3717 
Symbol 
ID6161728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4158994 
End bp4159440 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content65% 
IMG OID641666490 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001792736 
Protein GI171060387 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.147564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAG GCACCGTTCG TTTCCACCGC GTCCTTCGTT CGAAGCCCGA GCGGGTCTAC 
CGCGCCTTCC TGGACGCCGA TGCCCTGTCG AAGTGGCTGC CGCCGTACGG GTTCACCTGC
AAGGTGCACC ACCTGGACGT GCAGGTCGGC GGCACCTACC GGATGTCGTT CACGAACTTC
GCCAGCGGCA ACGGGCATTC GTTCGGCGGC CAGTATGTCG AACTGGTTGC GGACGAGCGG
ATCGTCTACA CCGACCGGTT CGACGATCCG AACCTGCCCG GCGAAATGCG CACGACCATC
CGCTTGCGGC CGGTGTCGTG CGGCACCGAG ATCACGATCG TCCAGGACGG GATCCCGGCG
GTGGTCCCGG TCGAGATGTG CTACCTCGGC TGGCAAGAAT CGCTGGAACA GCTGGCCAGG
CTGGTCGAGC CCGAAATCGC GGACTGA
 
Protein sequence
MTTGTVRFHR VLRSKPERVY RAFLDADALS KWLPPYGFTC KVHHLDVQVG GTYRMSFTNF 
ASGNGHSFGG QYVELVADER IVYTDRFDDP NLPGEMRTTI RLRPVSCGTE ITIVQDGIPA
VVPVEMCYLG WQESLEQLAR LVEPEIAD