| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3680 |
|---|
| Symbol | |
|---|
| ID | 6160428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 4114075 |
|---|
| End bp | 4114635 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641666453 |
|---|
| Product | phosphoglycerate mutase |
|---|
| Protein accession | YP_001792699 |
|---|
| Protein GI | 171060350 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0406] Fructose-2,6-bisphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCT ATCTGGCTCG CCACGGCGAG ACCGATCTCA ACATCGACGA CCGCTACCAG
GGCCGCAGCA ATGCGCTGCT CAACGAGCGG GGCCTGGCGC AGGCCGAGGC GCTGGCCGCG
GCGCTGCCGC CGGACATCAC GCACATCGTG GCCTCGCCGC TGCTGCGCGC GCTGCACACC
GCGCAGGCGG TCGGCCGTGC CCGCGGGCTG CCGGTGCGCA CGATGGCCGG CCTGCGCGAA
AAGCATTTCG GCCGCTTCGA CGGCCTGACG CCCGACGAGG TGGCGGCGCG TTTCCCGGTG
CTGTGGCACG GCGGCGTGCT GACCTCCTGG GACCAGCCGC CGCCCGGCGG CGAGACCACC
CGCGCGGTGG TGCAGCGGGT CTCGCTGTGC CTCGATGAAC TGCGCGCCGT GCACGCCGGC
GACACCGTGC TGCTGGTGGT GCACGGCTTC GTCGTGCGGG CCTTGCGCCA TCTGATCGAC
GGCCTCGACG AGTCCGAGTT CTTCATCGCC CCGCGCATCG GCAATGCCGA GTTCCTGGTG
CGTGAGCTGC CGGACACCTG A
|
|---|
| Protein sequence | MKLYLARHGE TDLNIDDRYQ GRSNALLNER GLAQAEALAA ALPPDITHIV ASPLLRALHT
AQAVGRARGL PVRTMAGLRE KHFGRFDGLT PDEVAARFPV LWHGGVLTSW DQPPPGGETT
RAVVQRVSLC LDELRAVHAG DTVLLVVHGF VVRALRHLID GLDESEFFIA PRIGNAEFLV
RELPDT
|
|---|
| |