| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3663 |
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| Symbol | |
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| ID | 6160313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4090878 |
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| End bp | 4092395 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666436 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_001792682 |
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| Protein GI | 171060333 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTGA TCGGCGCCGG CATCATGGGC GCCGGCATCG CTCAAGTTGC CGCGCAATCC
GGCCACGCCG TGATGCTGTT CGACGCCCGC GAAGGCGCCG CCGCCGAGGC CAAGGGCAAG
CTCGCGCAGA CGCTGGAGGC GCTGGTCGCC AAGGGCAAGC TGAGCGCCGA CAGCGTGGCG
CAGACCCTCG ATCGCATCGA GCCGATCGCC TCGCTCGAAG CCGCCGCCTC GGTGCGGCTG
GTGGTCGAGG CCATCGTCGA GAGGCTCGAC GTCAAGCGCG CGCTCTTCAA GCAGCTCGAA
GCCATCGTGG CCGACGACTG CGTGCTCGCC ACCAACACCT CGTCGATCTC GGTCACGGCC
ATCGCCAACG GCCTGCAGCG CCCGCAGCGG CTGGTCGGCA TGCACTTCTT CAACCCGGTG
GCGTTGATGA AGCTGGTCGA GGTGGTGTCG GGCCTGCAGA CCGACGCGGC GGTGGCCGAG
GCGATCTTCG AGCTGAGCAA AGCCTGGGGC AAGACGCCGG TGCACGCGCG CTCGACGCCG
GGTTTCATCG TCAACCGCAT CGCCCGGCCG TATTACGCCG AGACGCTGGC GCTGCTGCTG
GAGCAGGCCG CCACGCCGGC GGTGTTCGAC GCCTGCCTGC GCGCGGCGGG TTTCCGCATG
GGGCCGTGCG AGCTGATGGA CCTGATCGGC CACGACACCA ACTTCTCGGT GACGACCTCG
GTCTACGAGG CCAACTTCTT CGACAAGCGT TTCGTGCCCT CGCTGGTGCA GCGCGAGCTG
GTCGACGGCG GCCTGCTCGG GCGCAAGAGC GGGCGGGGGT TCTACCGCTA TCCCGAGGGC
GCCGGCAGCC TGCCGGTGGC CGTGCACGAA GCGCCCGCCA CGGCGCGCGA GATCAGCGTG
CACGGCGAGG GCGCGATCGC CGATCAGCTC GAACAGGCGG CCACCACGGC CCTGTCGGCG
CAAGGCTGGG GGCCGGCGCG GGTGCGCGGC AGCGGCTGGA CGGGCCTTGC GATCGACGGC
GCCCGCCTGG TGCTGACCGA CGGCCGCTGC GCCGATGAAC TCGCGGACGC GCTCGGCACG
GCCGACGTCG CGGTGTTCGA CCGGCCGCTG CTGCTGCCCT CGCCACCCGG CACGGCGCTG
GCGTTTGCGG TGGCCGGTGC GGCCAGCCAC GCCTGGCGCA AGCAGGCGCC GGCCTGGCTG
GCCGCGCTCG GTTTTGCGCC GATGCCGGTG GCCGATGCGC CGGGGCTGGT GGTGGCGCGC
ACGATCGCGA TGCTGATCAA CGAAGCGGCC GACGCGGTGC AGCAAGGCGT CTGCACACCC
GAAGGCGCCG ACGCGGCGAT GAAGCTGGGC GTCAACTACC CCGCCGGCCC GTTCGAGTGG
CTGGCGCGCT GGGATGCGCG CGGCGTGATC GGCCTGCTCG ACGCGCTCGA TGCGCATTAC
CGTGGCGAGC GCTATCGCGC CAGCCCGTGG CTCGGCCGGC GCGCGGCGCT GGACCGCGCC
ACCAGCCGCC ACGCTTGA
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| Protein sequence | MLVIGAGIMG AGIAQVAAQS GHAVMLFDAR EGAAAEAKGK LAQTLEALVA KGKLSADSVA
QTLDRIEPIA SLEAAASVRL VVEAIVERLD VKRALFKQLE AIVADDCVLA TNTSSISVTA
IANGLQRPQR LVGMHFFNPV ALMKLVEVVS GLQTDAAVAE AIFELSKAWG KTPVHARSTP
GFIVNRIARP YYAETLALLL EQAATPAVFD ACLRAAGFRM GPCELMDLIG HDTNFSVTTS
VYEANFFDKR FVPSLVQREL VDGGLLGRKS GRGFYRYPEG AGSLPVAVHE APATAREISV
HGEGAIADQL EQAATTALSA QGWGPARVRG SGWTGLAIDG ARLVLTDGRC ADELADALGT
ADVAVFDRPL LLPSPPGTAL AFAVAGAASH AWRKQAPAWL AALGFAPMPV ADAPGLVVAR
TIAMLINEAA DAVQQGVCTP EGADAAMKLG VNYPAGPFEW LARWDARGVI GLLDALDAHY
RGERYRASPW LGRRAALDRA TSRHA
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