Gene Lcho_3662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3662 
Symbol 
ID6160312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4090048 
End bp4090851 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content71% 
IMG OID641666435 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001792681 
Protein GI171060332 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC GACATGATCT GCAGACCCTG GTGCTGAGCC AGCGCCAGGC CGGCGTCGTC 
CAGCTGACGA TGAACCGCCC GGCGGTGTTC AACGCCTTCG ACGAGGCCAT GATCGGCGAG
CTGGGCGCCG TGTTCGCCCG CCTGTCCGAC GACGCCTCGG TGCGCGTGAT CGTGCTGGCC
GGCGAGGGCA AACATTTCAG CGCCGGCGCC GACCTGCAGT GGATGCAGCG CGCCAGCACC
GCCTCCGTCG AGTGGAACCT CGAGGACGCG CGCCGCTTCG CCGGCATGCT GGCGCTGATC
GAGAACTGCC CCAAGCCGAC CGTGGCACGC ATCCAGGGCG CCGCGCTCGG TGGCGGCGTC
GGCCTGGCCT GCGCCTGCGA CATCGCGATC GCGGCCGACA ACGCCAGCTT CGCGGTCAGC
GAGGCCAAGT TCGGCATCCT GCCGGCCGTC ATCGGGCCCT ACGTGACCAA CGCGGTCGGC
AAGCGCCAGG CGCGGCGGCT GGCGCTGACG ACCACCCGCA TCAAGGCCGC CGAGGCGCTG
GCGATCGGGC TGGTGCAGCA GGTGGTGGCG CTCGACCAAC TCGACGCCGC GGTCGACGCC
ACCGTGGCCG AGCTGCTGGC CGGCGGCCCG AACGCGCAGC GTGAGATCAA GCAGCTGTTC
GCACAACTCG AAGTCGGCCC GATCACCGCC GAGGTGCGCG AGCTGACGGC GATGACCATC
AGCCGCGTGC GCGGCACCGA CGAGGCCCGC GAGGGCTTCG CGGCCTTCCT GGGCAAGCGG
CCCGCCAACT GGATTCCGCA ATGA
 
Protein sequence
MSDRHDLQTL VLSQRQAGVV QLTMNRPAVF NAFDEAMIGE LGAVFARLSD DASVRVIVLA 
GEGKHFSAGA DLQWMQRAST ASVEWNLEDA RRFAGMLALI ENCPKPTVAR IQGAALGGGV
GLACACDIAI AADNASFAVS EAKFGILPAV IGPYVTNAVG KRQARRLALT TTRIKAAEAL
AIGLVQQVVA LDQLDAAVDA TVAELLAGGP NAQREIKQLF AQLEVGPITA EVRELTAMTI
SRVRGTDEAR EGFAAFLGKR PANWIPQ