Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3630 |
Symbol | |
ID | 6163227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4055809 |
End bp | 4056819 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641666403 |
Product | diacylglycerol kinase catalytic region |
Protein accession | YP_001792649 |
Protein GI | 171060300 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.491893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCA CCTCCCAACC CAGCGGCGTG GTGCTGCTCA ATCCGCATGC CAACGGCGGC AAGGCGCTGG CGCTGCGCCG CCCGATCGAG GCCTGGCTGG CGCGCAACAG CCCCGGCGTG TCGCTGCTGG TGCCCGACGG CATCGACCAG GCACTGGCCA CGCTGGCGAT CCTGGCCGCG CGCAGCCGGG TCGTGCTGGT GGGCGGCGAC GGCACGCTCA ACCGCATGCT GCCGGCGATC CTGCGCTGCG GCCACCGCAT CGGCCTGGTG CCGGCCGGCA AGCGCAACGA CACCGCCCGC GCGATCGGCA TCGACACGCT GCAGTGGCCC GAAGCGCTGG CCTACGCACT GCACGCGCCG ACCGGGCCGG TCGACCTGGG CCAGCTCGAC ACCGAAACCG AGACCCGCCA CTTCATCTCC GGGCTGAGTG CCGGCTTCGA CGCCCACATC GCGCGGGGCG TGACCGACGC GCCGCTGTGG CTGCGCGGCG CGCCGCGATA CCTGTGGGCC GGCGCCCAGG CCTGGCCCGG CCTGCATCTG CGCGAGCTGC GGGTCTGGAT CAACGGCCAG CTCGAACACG ACGGCAACAC GCTGATGGTG TCGGTGCACA ACACCGCCAG CAGCCACGGC GGCGTACCGG CAGCGCCCGG CGCGCGCATC AACGATCACC GGCTCGACAC GCTGGTGGTC GGCAGCGTCG GCCGTCTGGG CGTGCTGCCG CTGATGTGGC GGGTGGCCCG GGGTCGCCAT GTGCGACCGC CGCGGGTCAG CCTGCACGGC ACGCGCAAGA TGCTGGTCGA CGCCACCGAG CCGATGTCGG TGGTGATCGA CGGCGAGGCA CTCGCGCCGG TGGCGCGCTT CTCGGTGCAC GTGCTGACGC GTGGACTGCA TCTGGCCGGC GCCCACATGC TGGGCGAGCA GCTGGCCGAC AGCCACATCG TCAACCCCGC CGTCGTCAGC ACGATCATCG AGGGCGACGG CCCCTCGACC CTGCCACCCG CCGCCACCTG A
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Protein sequence | MSATSQPSGV VLLNPHANGG KALALRRPIE AWLARNSPGV SLLVPDGIDQ ALATLAILAA RSRVVLVGGD GTLNRMLPAI LRCGHRIGLV PAGKRNDTAR AIGIDTLQWP EALAYALHAP TGPVDLGQLD TETETRHFIS GLSAGFDAHI ARGVTDAPLW LRGAPRYLWA GAQAWPGLHL RELRVWINGQ LEHDGNTLMV SVHNTASSHG GVPAAPGARI NDHRLDTLVV GSVGRLGVLP LMWRVARGRH VRPPRVSLHG TRKMLVDATE PMSVVIDGEA LAPVARFSVH VLTRGLHLAG AHMLGEQLAD SHIVNPAVVS TIIEGDGPST LPPAAT
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