| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3588 |
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| Symbol | |
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| ID | 6162758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4004851 |
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| End bp | 4005555 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666361 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001792607 |
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| Protein GI | 171060258 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC TGGTCTACGT GATCGAGGAC GACGACGACG TCGCCCGCCT GGTGGTGCAC
GCCCTGCACG AGTTCGGTTT CCTCACCGAG ACCTTCCGCA GCGGCGCCGC CGTGCTGCGC
CGGCTGCAGA CCGAACGGCC CGAGCTGTTC ATCGTCGACC TCGGCCTGCC CGACATGGAC
GGCATGGCGC TGGTGCGCGA GATCGGCGCC ATGGGCAATT CCGGCGTGCT GATCCTGACC
GGCCGCGGCC ACACGGTCGA CCGCGTGATG GGGCTGGAAC TCGGTGGCGA CGACTACATG
GTCAAGCCTT TCGAGCCGCG CGAGCTGGTG GCGCGGGTGC GCAGCATCCT GCGCCGCCGC
ACGGCACCCG GCGCGGGCTG CGGCGCGCCG CAGCGCCGCT ACGCCAGCTT CCTGGGCTGG
ACGCTCGACT GCGCCGCCAA CGTGCTGCGC GCGGCCGACG GCGCCGAACA CCTGCTGGGC
ACCGCCGAGA CCCAGGTGCT GCGCGTGTTC GTCGAACGCC CGCACCAGAT CCTGACCCGC
GAGCAGCTGG TCGGCTCGCG CGACCTCTCG CCGCTGGACC GCAGCATCGA CGTGCGCATC
TCGCGCCTGC GCCGCAAGCT CGAGCCCGAC CCGCAACACC CCACCCTCAT CAAGACCGTC
TACGGCGCCG GCTATCTGTT CGCTGCGGCC GTGAGCTGGT CCTGA
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| Protein sequence | MTALVYVIED DDDVARLVVH ALHEFGFLTE TFRSGAAVLR RLQTERPELF IVDLGLPDMD
GMALVREIGA MGNSGVLILT GRGHTVDRVM GLELGGDDYM VKPFEPRELV ARVRSILRRR
TAPGAGCGAP QRRYASFLGW TLDCAANVLR AADGAEHLLG TAETQVLRVF VERPHQILTR
EQLVGSRDLS PLDRSIDVRI SRLRRKLEPD PQHPTLIKTV YGAGYLFAAA VSWS
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