| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3578 |
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| Symbol | |
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| ID | 6163148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3995258 |
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| End bp | 3996181 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666351 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001792597 |
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| Protein GI | 171060248 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGT TCATCGACAT CTTCAGCCAG TGGTCGTTCT GGAGCGCGGT GCTGCGCATC
GCCACGCCGC TGATCCTGGG CACGCTCGGC GTGCTGCTGT GCGAGCGCGC CGGGGTGCTG
AACCTGGGCA TCGAGGGCAT CATGGTCGCG GGCGCGTTCA GCGGCTGGCT GGCGGTCTAT
TCGGGGATGG GCCTGTGGGC CGGTGTCGGC GTGGCGGCAC TCACCGGCGC GGCCTTCGGC
CTGCTGCACG CGGGGCTGAC GGTGGGACTG GCGCTGTCGC AACATGTCTC GGGGCTCGGC
ATCACGATGC TGGCGACGGC GCTGAGCTAC TACGGCTACC GGGTCGGTTT CCCCAAGGTC
AGCACGCCGC CCACCATCAC GCCGTTTGCC GAGATGAGCG GCATCGGCAT CCCGGTGCTC
GCCAGCCAGA CGCCGCTCAC GCTGCTGGCC TTGCTGCTGG TGCCGCTGCT GGCCTGGCTG
CTGCAGCGCA CGCCGGCCGG GCTGATGTTG CGCATGGTCG GCGAGAACCC GCAGGCGGCC
GAAGGCCAGG GTGTGTCGGT GGCCTCCACG CGCACCGCGG CGATCGTGGC GGGCTCGGCG
CTGATGGGCG TGGCGGGCTC GTTTCTCACG CTGGCTGCCT TCAACGCCTT CTTCTTCAAC
ATGGTCAACG GCCGCGGCTG GGTCTGCGTG GCGCTGGTGG TGTTTGCCTC GTGGCGGCCG
GGCAAGGCGC TGGCCGGCGC GCTGCTGTTC GCGGTGTTCG ATGCGCTGCA GCTGCGGCTG
CAGCAATCGG CTTCGAGTCT GCTGCCGTAT CAGGTCTACC TGATGCTGCC GTATCTGCTG
TCGATCGTGG CGCTGGTGGT GGTGGCGCGC AAGGCGGCCT ATCCGCAGGC GCTGATGAAG
CCCTATCGCA AGGGCGAGCG CTGA
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| Protein sequence | MSEFIDIFSQ WSFWSAVLRI ATPLILGTLG VLLCERAGVL NLGIEGIMVA GAFSGWLAVY
SGMGLWAGVG VAALTGAAFG LLHAGLTVGL ALSQHVSGLG ITMLATALSY YGYRVGFPKV
STPPTITPFA EMSGIGIPVL ASQTPLTLLA LLLVPLLAWL LQRTPAGLML RMVGENPQAA
EGQGVSVAST RTAAIVAGSA LMGVAGSFLT LAAFNAFFFN MVNGRGWVCV ALVVFASWRP
GKALAGALLF AVFDALQLRL QQSASSLLPY QVYLMLPYLL SIVALVVVAR KAAYPQALMK
PYRKGER
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