| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3556 |
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| Symbol | |
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| ID | 6161195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3976318 |
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| End bp | 3976890 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666329 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792575 |
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| Protein GI | 171060226 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3495] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.171808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTTG CCCTCAAGCT CGGCGCCCTG ATGCTGGCCG CCATGGCCGG CGTCGCGGTG
TTTGCTCCGG TGCCATCGGC GCAGGCGGCC GATGCCGGCC GTGCCGCGCC GGCCCCCTTC
AAGGAGATCC GCTGGGACGA ACTGGTGCCC AAGGACTGGG ATCCTTACAA GCGTTTCCGC
GACAAGAAGC TCGACGGCCT GACCGACAAC GACCCGCGCT CGGAGGCGAT GCTCAAGGAG
ATGCGCGAGG TCTGGGACGC CGCGCCCACC AACCCGCTGA TGAACGGCGC GCGCGTGCGG
CTGGCCGGCT ACATCGTGCC GCTCGAAGAG GCCAAGGGCG AGTTGAAGGA GTTCCTGTTG
GTGCCGTATT TCGGTGCCTG CATCCACACC CCGCCGCCGC CGGCCAACCA GATCATCCAC
GTGCTGCCGG CCCAGCCGCT GAAGGGTTTC AAGGGCATGG TGCCGGTGTG GGTCAACGGC
ACGCTCAAGA CGCAGCGCGA CGACTCGATG ATGGGCGTGA GCGGCTATCA CCTCGACGCC
GTGAAGGTCG AGCACTACGA GGTGCCCAAG TAG
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| Protein sequence | MKLALKLGAL MLAAMAGVAV FAPVPSAQAA DAGRAAPAPF KEIRWDELVP KDWDPYKRFR
DKKLDGLTDN DPRSEAMLKE MREVWDAAPT NPLMNGARVR LAGYIVPLEE AKGELKEFLL
VPYFGACIHT PPPPANQIIH VLPAQPLKGF KGMVPVWVNG TLKTQRDDSM MGVSGYHLDA
VKVEHYEVPK
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