Gene Lcho_3518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3518 
Symbol 
ID6162115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3930909 
End bp3931514 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content74% 
IMG OID641666291 
Producthypothetical protein 
Protein accessionYP_001792537 
Protein GI171060188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00267741 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCCCTC TGCGCCTGAG TTCGGGCCGC GTCGCCTGGC TGATGGTCTG GGCGCTGCTG 
CTGGTGCCTG CGCTGCTCAT GGGCGTGGCC GATCCGCTCA GCCGCGAGGT GCTGAGCTGG 
CAGCCGGCCC GGGCCGGGGC CGAGCCGTGG CGCTGGTGGA GCGCCGCCTG GGTGCATTTC 
AGTGACTTGC ACTGGCTGGC CAACCTGCTC GGTGCGCTGC TGGTGGCCTT GTTGGGCTGG 
TTCCTGAATC CGCCGCGAGC GGCCGCCTGG GCCTGGGCGC TGGCCTGGCC GCTGACCCAT 
CTGAGCCTGC TGATTCAGCC GCAGCTGCAG CGATACGGCG GGTTGTCGGG CGTGCTGCAC 
GCGGGCGTGG CGGTGTGCGC GACCGGCCTT TGCCTGCGCG GGCGATCGAC CGGCGAGCGC 
GGGCTGGGGG CGGCGGTGCT GGCCGGCCTG CTGCTCAAGG TGGCGCTCGA ACAGCCGTGG 
GCCGGGCCGC TGATCCACGT CGCCGGCTGG GACATCGCGA TCGCCCCGCT GGCGCACGCC 
GGCGGCGTGT TCTGGGGCAC GCTGCTGGGG GCGATCGGGC TGCGTTTCTG GCCGGCGGGG 
CGCTGA
 
Protein sequence
MRPLRLSSGR VAWLMVWALL LVPALLMGVA DPLSREVLSW QPARAGAEPW RWWSAAWVHF 
SDLHWLANLL GALLVALLGW FLNPPRAAAW AWALAWPLTH LSLLIQPQLQ RYGGLSGVLH 
AGVAVCATGL CLRGRSTGER GLGAAVLAGL LLKVALEQPW AGPLIHVAGW DIAIAPLAHA 
GGVFWGTLLG AIGLRFWPAG R