| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3442 |
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| Symbol | |
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| ID | 6160196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3844669 |
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| End bp | 3845643 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666217 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792465 |
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| Protein GI | 171060116 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0502272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC TGATGCTGGC CTCGTTGGCC GTTCTGACTG CAGGCGCGGC ATTCGCGCAG
GAATATCCGA GCAAGCCGGT CACGATCGTG GTGCCGTTTG CAGCCGGTGG CCCGACCGAC
AAGGTCGCAC GCGACTTCGC CGAAGCGCTG CGCAAGCCGC TGGGCGGCGC GACGATCGTG
GTCGAGAACG TCGGCGGCGC CGGCGGCACG CTGGGCGCAT CGAAGGTCGC CAAGGCGGCA
CCGGACGGCC ACACGCTGCT GCTGTATCAC GTCGGCATGG CGACCTCGCC GGCGCTGTAC
CGCAACATGC CCTACAAGAC GCTCGAGGAC TTCGAGTACC TGGGCCTGAT CAACGAAGTG
CCGATGACGC TGGTCGGCCG CTCGACGCTG CCGGCCAACA ACTACGCCGA ACTGGTGAAG
TGGCTCGAGG CCAACCGCGG CAAGATCAAC CTGGCCAACG CCGGCCTGGG CGCCGCCTCG
CACCTGTGCG GCCTGCTGTT CCAGCAGAGC CTCAAGATCG ACATGACCAC CGTGCCGTAC
AAGGGCACTG CGCCGGCCAT GACCGATCTG CTGGGCGGCC AGGTCGACCT GATGTGCGAC
CAGACCACCA ACACCACCAG CCAGATCGCG TCGGGCAAGG TCAAGGCGTT TGCGGTCACC
AGCAGCAAGC GCCTGACGAC GCCGGCCCTG TCCAATCTGC CGACGCTCGA CGAATCCGGC
CTGAAGGGTT TCAACGTGTC GATCTGGCAC GGCCTGTATG CCCCCAAGGG CACGCCCAAG
GCGGTGCTCG ACAAGGTCAA CACCGCCCTC AAGGCTGCGC TGAAGGATCC GGAATTCATC
AAGCGTGAAG AAGCGCTGGG CGCCGTGGTG ACGACCGATG CGCGCACCAA CCCGGCCGAG
CACAAGGCCT GGGTCACCAG CGAGATCAAC AAGTGGACGC CGGCGATCAA GGCCGCTGGC
CAGTACGCCG ACTGA
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| Protein sequence | MKKLMLASLA VLTAGAAFAQ EYPSKPVTIV VPFAAGGPTD KVARDFAEAL RKPLGGATIV
VENVGGAGGT LGASKVAKAA PDGHTLLLYH VGMATSPALY RNMPYKTLED FEYLGLINEV
PMTLVGRSTL PANNYAELVK WLEANRGKIN LANAGLGAAS HLCGLLFQQS LKIDMTTVPY
KGTAPAMTDL LGGQVDLMCD QTTNTTSQIA SGKVKAFAVT SSKRLTTPAL SNLPTLDESG
LKGFNVSIWH GLYAPKGTPK AVLDKVNTAL KAALKDPEFI KREEALGAVV TTDARTNPAE
HKAWVTSEIN KWTPAIKAAG QYAD
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