| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3388 |
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| Symbol | |
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| ID | 6162076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3767281 |
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| End bp | 3768135 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666163 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001792411 |
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| Protein GI | 171060062 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC GAATCCGCGC CTCGCTGCCC GCACTCTCGC CTGCCGAACA GCGGGTGGCC
AAACTGGTGC TCGCCGATGC CCGCAGCTTT TCAAGCCTGC CGGTGGCCGA ACTGGCCGAC
CGGGCGCACG TCAGCAAGCC GACGGTGGTG CGCTTCTGCC GCAGCGTCGG CTATGACGGT
CTGGCGGACT TCAAGCTGAA GCTGGCCGGC ACCGTCAACG AGGGCGTGCC CTTCGTGCAC
CGCGCGGTCG ACGAGGACGA CAAGCCCAAC GACCTGATCG TCAAGGTGAT CGACAACACG
GTCAGCGCGC TGCTGAAGTT CCGCAACGAC CTCGCCACGC ACGCGATGGA GCGCGCGATC
GAGGCGCTCA CCGCCACCGC GCGTGCCGGC AAGCGCATCC AGTTCTACGG GGTCGGCAAT
TCGGGCATCG TGGCGCAGGA CGCGCAGCAC AAGTTCTTTC GCCTGGGCGT GCATGCCGTC
GCCTTCAGCG ACGGCCACGT GCAGGTGATG GCCGCGACGA TGCTGGAGCC CGGCGATTGC
GCCGTGATGA TCTCCAACTC GGGCCGCACC CGCGATCTGC TCGATGCCGC CGAGATCGCC
CGACGCAAGG GCGCGAACAC CATCGTGATC GGCGCCAGCG GTTCACCCCT GGCGCACCAG
GCGCAGATCC TGCTGGCGGT CGATCACCCG GAAGACTACG ACCGCTACAG CCCGATGGTC
AGCCGCCTGC TGCACCTGAC GGTGATCGAC ATCCTGACCA CCGCCGTGTC GCTGCGACTC
GGGCCGGAGC TGCGCCCGAT GCTGCAGGAG ATCAAGAAGA ACCTGCGCGC CAAGCGCTAC
GCATCGCCGG AATGA
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| Protein sequence | MLDRIRASLP ALSPAEQRVA KLVLADARSF SSLPVAELAD RAHVSKPTVV RFCRSVGYDG
LADFKLKLAG TVNEGVPFVH RAVDEDDKPN DLIVKVIDNT VSALLKFRND LATHAMERAI
EALTATARAG KRIQFYGVGN SGIVAQDAQH KFFRLGVHAV AFSDGHVQVM AATMLEPGDC
AVMISNSGRT RDLLDAAEIA RRKGANTIVI GASGSPLAHQ AQILLAVDHP EDYDRYSPMV
SRLLHLTVID ILTTAVSLRL GPELRPMLQE IKKNLRAKRY ASPE
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