| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3376 |
|---|
| Symbol | |
|---|
| ID | 6161076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 3752721 |
|---|
| End bp | 3753113 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641666151 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_001792399 |
|---|
| Protein GI | 171060050 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCG TGACCCAAAC CCGGGACAAG ACCCTGGAAT CCACCCCCCC GGCCCGCCAG
GAGCCCGCGC TGCTGACACC GGTCGACGTG ATCGAAGACG CCACCGGCAT CACGCTGTAT
GCCGACCTGC CCGGCGTGGC GCGCGACAAG CTGAACCTGA AGGTCGAAGG CGACCAGCTC
GGCATCGACG CCGAGCTGGC GCTGCCGATG CCGCAAGGCC TGGAGGTCAG CCACGCCGAG
GTGACGCTGC AGCGCTGGCG CCGCACCTTC ACGCTCAGCA AGGAGCTCGA CGCCGACCAG
GTCAGCGCCG AGCTCAGCCA GGGCGTGCTG CGCGTGCACA TCCCGAAGGC AGCGCACGCG
CAGCCGCGCA AGATCAGCGT GCAGGTGAGC TGA
|
|---|
| Protein sequence | MNAVTQTRDK TLESTPPARQ EPALLTPVDV IEDATGITLY ADLPGVARDK LNLKVEGDQL
GIDAELALPM PQGLEVSHAE VTLQRWRRTF TLSKELDADQ VSAELSQGVL RVHIPKAAHA
QPRKISVQVS
|
|---|
| |