Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3360 |
Symbol | |
ID | 6161047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3735117 |
End bp | 3736703 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641666135 |
Product | methane/phenol/toluene hydroxylase |
Protein accession | YP_001792383 |
Protein GI | 171060034 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCC GTGTCGTGAA GAAGAAACTC GGTCTGAAGG ACCGCTACGC CGCCATGACC CGCGGCCTGG GCTGGGAGAC CACCTACCAG CCGATGGAGA AGGTCTTTCC GTACGACAAG TACGAGGGCA TCAAGATCCA CGACTGGAAC AAGTGGGAAG ACCCGTTCCG CCTGACGATG GACGCCTACT GGAAATACCA GGGTGAGAAG GAGAAGAAGC TCTACGCGGT GATCGACGCC TTTGCGCAGA ACAACGGCCA GCTGGGCGTG AGCGACGCGC GTTACGTCAA TGCGCTCAAG CTCTTCATTC AAGGCGTGAC GCCGCTCGAA TACTACGCAC ACCGCGGCTT CGCACACGTG GGCCGCCAGT TCACCGGCGA GGGCGCACGG GTGGCCGCGC AGATGCAGTC GATCGACGAA CTGCGCCATT ACCAGACCGA GACGCACGCG ATCTCGCACT ACAACAAGTA CTTCAACGGC ATGCATCACT CGAACCACTG GTTCGACCGG GTCTGGTATC TGTCGGTGCC GAAGTCCTTC TTCGAGGATG CGATCACCGG CGGGCCGTTC GAGTTTCTGG TGGCGGTGAG CTTCTCGTTC GAATACGTGC TGACGAACCT GCTGTTCGTG CCCTTCATGA GCGGCGCGGC GCACAACGGC GACATGTCGA CCGTGACCTT CGGCTTCTCG GCGCAATCGG ACGAATCGCG CCACATGACA CTCGGCATCG AGTGCATCAA GTTCCTGCTC GAACAGGATC CGGCCAATGT GCCGATCGTG CAGGGCTGGA TCGATAAGTG GTTCTGGCGC GGCTATCGCC TGCTCACGCT GGTGGCGATG ATGCAGGACT ACATGCTGCC CAAGCGCGTG ATGAGCTGGA AGGAAGCCTG GGAGATGTAC GCCGAGCAGA ACGGCGGCGC GCTGTTCAAG GATCTGGCGC GTTACGGCAT CCGCGAGCCC AAGGGCTGGA AGGACGCCTG TGAAGGCAAG GACCACATCA GCCACCAGGC CTGGGCCACC TTCTACAACT ACAACGCTGC CGCGCCCTTC CACACCTGGA TTCCCAAGGA AGACGAGCTG GCCTGGCTGT CGGAAAAGTA CCCCGACACC TTCGACAAGT ACTACCGCCC GCGCCTTGAG CACTGGCAGG CCGAGGCCGA GAAAGGCAAC CGCTTCTACA ACAAGACGCT GCCGATGCTG TGCACCACCT GCCAGATCCC GATGCTGTTC ACCGAGCCCG GTGACGCCAG CAAGATCTGC TACCGCGAGA GCGATTACCT GGGCGACAAG TACCACTTCT GCTCGGACCA CTGCAAAGGC ATCTTCGATT TCGAGCCACA GAAGTACGTG CAGAGCTGGC TGCCGGTGCA CCAGATCTAC CAGGGCCACT GCTTCAAGCC GGACACCGAT CCGACCGCCG AAGGCTTCGA TCCGCTGATC GCGGTGCTGC AGTGGTACGA GATGGAAATC GGCCGCGACA ACTTCGATTT CGAAGGCTCC GAAGACCAGA AGAACTTTGC CGCCTGGCGC GGTGAAACCC TGCCCGGCGC AGCCGAGGCC AGCCCTGCAG AAGGAGTGCA GAAATGA
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Protein sequence | MDTRVVKKKL GLKDRYAAMT RGLGWETTYQ PMEKVFPYDK YEGIKIHDWN KWEDPFRLTM DAYWKYQGEK EKKLYAVIDA FAQNNGQLGV SDARYVNALK LFIQGVTPLE YYAHRGFAHV GRQFTGEGAR VAAQMQSIDE LRHYQTETHA ISHYNKYFNG MHHSNHWFDR VWYLSVPKSF FEDAITGGPF EFLVAVSFSF EYVLTNLLFV PFMSGAAHNG DMSTVTFGFS AQSDESRHMT LGIECIKFLL EQDPANVPIV QGWIDKWFWR GYRLLTLVAM MQDYMLPKRV MSWKEAWEMY AEQNGGALFK DLARYGIREP KGWKDACEGK DHISHQAWAT FYNYNAAAPF HTWIPKEDEL AWLSEKYPDT FDKYYRPRLE HWQAEAEKGN RFYNKTLPML CTTCQIPMLF TEPGDASKIC YRESDYLGDK YHFCSDHCKG IFDFEPQKYV QSWLPVHQIY QGHCFKPDTD PTAEGFDPLI AVLQWYEMEI GRDNFDFEGS EDQKNFAAWR GETLPGAAEA SPAEGVQK
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