Gene Lcho_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3357 
Symbol 
ID6160335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3733281 
End bp3733673 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content66% 
IMG OID641666132 
Productferredoxin 
Protein accessionYP_001792380 
Protein GI171060031 
COG category[C] Energy production and conversion 
COG ID[COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCT CATTCGACAG CCGACCCAAG GTGAATGTCT GCGTGGCGCA GACCGGCGAG 
AGCTACCCCT GCGCCACCAA CGAGAGCCTG CTCAAGGGCA TGCTCAAACT CGGCCGCAAG
GGCATCCCTG CGGGTTGCGT GAACGGCGGC TGCGGGGTGT GCAAGGTGCG CATCGTCGAG
GGCAGCGTGA CCGTGCTCGG GCCGGTCAGC CGGGCCCATG TGAGTGCCGA AGAAGAGGGC
TGCGGCATCA CGCTGGCCTG CCGCGTGGCC CCCGCCACCG CGGTGCGGCT GGAGGTGATC
GGCAAGCTCG AGAAACCTTT TTCCAAACGG CCCGCCCCAG CGGCGGACCA CAGAGCAACG
CTGCAGATGA CGCAGCAACA AGGAGACATG TGA
 
Protein sequence
MAFSFDSRPK VNVCVAQTGE SYPCATNESL LKGMLKLGRK GIPAGCVNGG CGVCKVRIVE 
GSVTVLGPVS RAHVSAEEEG CGITLACRVA PATAVRLEVI GKLEKPFSKR PAPAADHRAT
LQMTQQQGDM