Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3357 |
Symbol | |
ID | 6160335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3733281 |
End bp | 3733673 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641666132 |
Product | ferredoxin |
Protein accession | YP_001792380 |
Protein GI | 171060031 |
COG category | [C] Energy production and conversion |
COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTCT CATTCGACAG CCGACCCAAG GTGAATGTCT GCGTGGCGCA GACCGGCGAG AGCTACCCCT GCGCCACCAA CGAGAGCCTG CTCAAGGGCA TGCTCAAACT CGGCCGCAAG GGCATCCCTG CGGGTTGCGT GAACGGCGGC TGCGGGGTGT GCAAGGTGCG CATCGTCGAG GGCAGCGTGA CCGTGCTCGG GCCGGTCAGC CGGGCCCATG TGAGTGCCGA AGAAGAGGGC TGCGGCATCA CGCTGGCCTG CCGCGTGGCC CCCGCCACCG CGGTGCGGCT GGAGGTGATC GGCAAGCTCG AGAAACCTTT TTCCAAACGG CCCGCCCCAG CGGCGGACCA CAGAGCAACG CTGCAGATGA CGCAGCAACA AGGAGACATG TGA
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Protein sequence | MAFSFDSRPK VNVCVAQTGE SYPCATNESL LKGMLKLGRK GIPAGCVNGG CGVCKVRIVE GSVTVLGPVS RAHVSAEEEG CGITLACRVA PATAVRLEVI GKLEKPFSKR PAPAADHRAT LQMTQQQGDM
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