Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3349 |
Symbol | |
ID | 6160714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3726896 |
End bp | 3727330 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641666124 |
Product | hypothetical protein |
Protein accession | YP_001792372 |
Protein GI | 171060023 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTCCT ACCCCCGCAA CAGCTCCGAA GCCGCCGCAC GCATCGTGGC ACTCGTCGTC ATTGCCGACG GCTATGTCTG CCGTTCGGAG TTCGATGCAT GGAACCAGCT AGACGGGCCG CGTGAGCTGG GCCTGGCGTC CGACGGCATG CCGCGCATCG TCCAGTCCCT GTGCGAGGAC CTCCTGCTCG ATGCCTATGC CGGCGGATCG ATGATGGCCT GCGTGGATGA CGGCACGTTG GCGTCGCTGA TGGCCGAGGT GGACGACCCA GCGCTTCAAC GCAAGGTGCT GCGGCTCGCA ATCGCTGCCG CACGCGCCGA CCGGCATCTT GCCGACGGGG AAGCCCTGGT CTTGGCGGCT GCTCGCCGCT ATTGGGGCAT CGGTGACGAG GCCCAGGCTG GCAGCCTCGT CGCGGCCGAC CCTCCGTCCG CCTGA
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Protein sequence | MRSYPRNSSE AAARIVALVV IADGYVCRSE FDAWNQLDGP RELGLASDGM PRIVQSLCED LLLDAYAGGS MMACVDDGTL ASLMAEVDDP ALQRKVLRLA IAAARADRHL ADGEALVLAA ARRYWGIGDE AQAGSLVAAD PPSA
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