Gene Lcho_3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3349 
Symbol 
ID6160714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3726896 
End bp3727330 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content68% 
IMG OID641666124 
Producthypothetical protein 
Protein accessionYP_001792372 
Protein GI171060023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCCT ACCCCCGCAA CAGCTCCGAA GCCGCCGCAC GCATCGTGGC ACTCGTCGTC 
ATTGCCGACG GCTATGTCTG CCGTTCGGAG TTCGATGCAT GGAACCAGCT AGACGGGCCG
CGTGAGCTGG GCCTGGCGTC CGACGGCATG CCGCGCATCG TCCAGTCCCT GTGCGAGGAC
CTCCTGCTCG ATGCCTATGC CGGCGGATCG ATGATGGCCT GCGTGGATGA CGGCACGTTG
GCGTCGCTGA TGGCCGAGGT GGACGACCCA GCGCTTCAAC GCAAGGTGCT GCGGCTCGCA
ATCGCTGCCG CACGCGCCGA CCGGCATCTT GCCGACGGGG AAGCCCTGGT CTTGGCGGCT
GCTCGCCGCT ATTGGGGCAT CGGTGACGAG GCCCAGGCTG GCAGCCTCGT CGCGGCCGAC
CCTCCGTCCG CCTGA
 
Protein sequence
MRSYPRNSSE AAARIVALVV IADGYVCRSE FDAWNQLDGP RELGLASDGM PRIVQSLCED 
LLLDAYAGGS MMACVDDGTL ASLMAEVDDP ALQRKVLRLA IAAARADRHL ADGEALVLAA
ARRYWGIGDE AQAGSLVAAD PPSA