| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3345 |
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| Symbol | |
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| ID | 6161258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3722424 |
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| End bp | 3723284 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666120 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001792368 |
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| Protein GI | 171060019 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATT TCCTCGCCGT GGCCGAGGAG CGCCACATCG GCCGCGCCGC CGAGCGCCTG
CACATGGCGC AGCCGCCGCT GACGCGCCAG ATCCACGCGC TCGAAGCCGA GCTGGGCACG
GCGCTGTTCA TCCGCACCCC CAAGGGCGTG GAGCTGACCG AAGCCGGCCA GACCCTGCTC
GACGAGGTGC CCAACCTGCT GACGCTGGCG CAGCGCGCCC GCGAGCGCAC CCGCGCCGCC
GGCCAGGGCG TAATCGGCCG GCTCGACGTC GGCCTGTTCG GGTCGGGCGT GCTCGACGTC
ATCCCGCGGC TGCTGGCGCG TTTCCACGCC CAGCGGCCCG AGGTGCGCAT CGTGCTGCAC
ACGATGACCA AGGCCGAGCA GCTCGACGCC TTGCGCGAGC GCCGCATCAG CGTCGGCTTC
AACCGCCTGG TGCCGCCCGA GCCCGATCTG GTGATCGAGA CCGTGCTGCG CGAGCGCATG
CGCGTGGCGC TGCCCGACAC GCACCGGCTG TGCGCACAGG CCAGCGTGTC CATCCCCGAC
CTGGCCGGCG AGCCGCTGAT CCTCTACCCC AACCTGCCGC TGCCCGGCCT GGCGCAGCAG
GTGATGCAGG CGTTTGCGCG CGAGGGCACG CCGCTGCTGG TGGAGCAGGA GGTGGAAGAC
GTGCTGACCG CCATCGCGCT GGTGGCGGGG GGTTTTGGTG CGTGCATCAC CACCGCCAGC
AGCGAGAGCC TGCGCCTGCC GGGCGTGGCC TACCGGCCGC TCGAATGTTC GTATCTGAAG
GACATCGAGC TGAGCTGCAT CCACCGGCGC GGGGATGGGT CGCCGGTGTT GGCGGCGTTT
CTGGCGGTGG TGAGGGGGTA G
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| Protein sequence | MRYFLAVAEE RHIGRAAERL HMAQPPLTRQ IHALEAELGT ALFIRTPKGV ELTEAGQTLL
DEVPNLLTLA QRARERTRAA GQGVIGRLDV GLFGSGVLDV IPRLLARFHA QRPEVRIVLH
TMTKAEQLDA LRERRISVGF NRLVPPEPDL VIETVLRERM RVALPDTHRL CAQASVSIPD
LAGEPLILYP NLPLPGLAQQ VMQAFAREGT PLLVEQEVED VLTAIALVAG GFGACITTAS
SESLRLPGVA YRPLECSYLK DIELSCIHRR GDGSPVLAAF LAVVRG
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