| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3284 |
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| Symbol | |
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| ID | 6162423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3644426 |
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| End bp | 3645256 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666059 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001792307 |
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| Protein GI | 171059958 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4130] Predicted sugar epimerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00754219 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCCGA TCCGTTTTGC GCTCAACCGC ATGTCCGCCC CCCGCATGGC CTTCGACGCC
TATTGCGCCA TGACCCGCCG CCTGGGCGTG TCGGCGATCG AGATCCGCAA CGACCTCGCC
GGCGTCGAGA TCACCGACGG CACGCCCGCC GCCCACATCG GCGAGATCGC CCGCGCCCAC
GGCCTGGTGA TCCGCTCGAT CAACGCGCTG CAGCGCTTCG AGCAGTTCGA CGCCGAGTGC
GAGGCCGAGG CCATCGCGCT GGCCCGCTAC GCCCGCGACT GCGGCGCCGA GGCGCTGGTG
CTCTGCCCCA CCAACAGCCG CGCTGACAAG CGCACGCCCG AAGAGCGCCA CGCCGCGCTG
GTGCACGCGC TGACATCGCT CAAGCCGATC CTCAACGAGT ACGGCATCGT CGGCCTGGTC
GAGCCGCTGG GCTTCGAGGA ATGCGCGGTG CGCCGCAAGT CGCAGGCGGT GCGCGCGTTT
GAAGAAATCA AGGCCGACGC GACCTTCCGC CTCGTGCACG ACACCTTCCA CCACCACCTC
GCCGGCGAGG GCCTGTTCTT CCCCGAGTGG ACCGGCCTGA TCCACATCTC CGGCGTCGAG
GATTCGGCCG TCACCGTGCC CGACATGCGC GACGGCCACC GCGTGCTGGT CGGCGGTGCC
GACCGCCTCG GCAACCCGGC GCAGATCCGC CGCCTGCTGG ATGCGGGTTA CGCCGGCTGC
GTGTCGTTCG AGCCCTTCGC CGAATCGGTC GCCGCCTCGG CCACGATCGA AGCCGAACTC
GCCGCCAGCA TGGCCTGGCT GCGCGATGCG GTCGAAGCCG CACACGCCTG A
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| Protein sequence | MTPIRFALNR MSAPRMAFDA YCAMTRRLGV SAIEIRNDLA GVEITDGTPA AHIGEIARAH
GLVIRSINAL QRFEQFDAEC EAEAIALARY ARDCGAEALV LCPTNSRADK RTPEERHAAL
VHALTSLKPI LNEYGIVGLV EPLGFEECAV RRKSQAVRAF EEIKADATFR LVHDTFHHHL
AGEGLFFPEW TGLIHISGVE DSAVTVPDMR DGHRVLVGGA DRLGNPAQIR RLLDAGYAGC
VSFEPFAESV AASATIEAEL AASMAWLRDA VEAAHA
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