| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3245 |
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| Symbol | |
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| ID | 6160866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3599372 |
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| End bp | 3601393 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666019 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_001792268 |
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| Protein GI | 171059919 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGG GCGTCTGCTA CTACCCCGAA CACTGGCCGC CATCCGGGTG GGCCGATGAC
GCGCAGCGCA TGCGCGCGAT GGGCATCAGC TGGGTGCGCA TCGCCGAGTT CGCCTGGAGC
CGCATCGAAC CGTCGCCGGG CGTGTTCGAC TGGGCCTGGC TCGATGAAGC GATCGAGACG
CTGCACGCGC AGGGCCTGAA GGTCGTGATG TGCACGCCCA CCGCCACGCC GCCGAAGTGG
CTGGTGGACA CGATGCCGGA CATGCTCGCG ATCGACGCCC ACGGCCAACC GCGCGGCTTC
GGCTCGCGCC GGCATTACTG CTTCTCGCAC GCCGGCTACC GGGCCGAGTC GCGCCGCATC
AGTCGCGCAG TGGCCGAACG CTACGGTCAA CACCCAGCCG TGGCCGCCTG GCAGACCGAC
AACGAATACG GCTGCCACGA CACGGTGTTG AGTTATTCGG CCGCCGCCAA GGCCGGTTTC
CGCCGCTGGC TGCAGGCGCG TTACGGCGAC ATCGCCGCGC TCAACACGGC CTGGGGCACG
GTGTTCTGGA GCATGGAATA CCGCTCGTTC GATCAGATCG ACGCGCCGGT CGGCACCGTC
ACCGAGGCGC ATCCGGCGCA CCGGCTCGAC TGGCGCCGCT TCGCCTCCGA CGAGGTGCGA
GCCTTCAACC GCGAGCAGGT CGAGATCCTG CGCGAGCTGT CGCCTGCTCG GCCGGTGTCG
CACAACTTCA TGGGCTTCTT CACCGAGTTC GACCACCACG ACGTGGCCGC CGATCTCGAC
ATCGCCACCT GGGACAGCTA CCCGCTCGGC TTCACGCAGA ACTTCTTCCT CTCGGCCGAC
GAGAAGGCGC GTTACGCCCG CGTCGGCCAC CCGGACATCC CGGGCTTTCA CCACGACCTG
TATCGCGGCA TGTGCGCCAG CACGCGCGCC GATGCGCCTG CCCACGGCCG CTGGTGGGTG
ATGGAGCAGC AGCCCGGCCC GGTCAACTGG GCGAGCTGGA ACACCGCGCC GCATGACGGC
ATGGTGCGGC TGTGGAGCTG GCAGGCGTTC GCGCACGGCG CAGAGGTGGT GAGCTACTTC
CGCTGGCGCC AGGCGCCGTT TGCGCAGGAG CAGATGCACA CCGGCTTGCA CCGGCCGGAC
CGCAGTGTCG ACCAGGGCGG CGTCGAAGCC GCACAGGTCG GCGCCGAGTT GCAGGCGCTG
TCCACGCAGA TGGATTTGAA CGCGCAAGGC ATCGTCAACC GCGTCGCGCT GGTGTTCGAC
TACGACAGCT TGTGGATGGC GCAGATCCAG CCGCAGGGCG CCGACTACAA CCCGCTGGAG
CTGCAGTTCC GCGTCTACAG CGCGCTGCGC CAGCTGGGGC TGGATGTCGA CATCGTGAGC
CCGAACGCCG CGCTGGCCGG CTACGCGCTG ATCGTGCTGC CGGTGCAGTT GCATGCGTCA
GCCGCGCTGG TGAAGGCGCT CACGCAAGCC GCAGCAGCCG GCGCGCAGAT CGTGCTCGGC
CCACGTGCCG GCGCCAAGAC CGAGGTGCTG GCGATACCCG AGAACCTCGC GCCCGGCGCC
TTGAGCGCGC TGGCCGGCGT GCAGGTGCTG CGGGTGGCAT CGCTGCCGCC GGGCGTGCAG
GCGGTGATCC GCTTCGAGGG CGATGCAGGT TCAGTCGCCA CGGCCCAGCG CTGGCGCGAG
GACCTCGCGC TGACGGGCGC GCAGGCCGAG GCGCTGTTCG ACGACGACGG CCGCGCCGCC
GTCACGCGAC TGGGCAGCTT GCGCTACGTC GCCGGCTGGC TCGACGCCGA CGGCTGGCGG
CAACTTCTGA TGCGCGCGGC CACCGACGCC GGCCTGTCGC CGCAGCCGCT GCCCGCCGAC
CTGCGCGTCA GCCGCATCGG CGGCCTGCTG CTGGCCTGCA ACTTCTCGGA TCGCACGCTG
GCCTACACGC CGACGTCGAC GCCCTCGTCC TCTTCGGCCG CGCCCCTGCT GGGCTCGGCA
ACGCTCGCGC CGCGGGGCAT CGCCCTGTGG CACCTGAACT GA
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| Protein sequence | MQLGVCYYPE HWPPSGWADD AQRMRAMGIS WVRIAEFAWS RIEPSPGVFD WAWLDEAIET
LHAQGLKVVM CTPTATPPKW LVDTMPDMLA IDAHGQPRGF GSRRHYCFSH AGYRAESRRI
SRAVAERYGQ HPAVAAWQTD NEYGCHDTVL SYSAAAKAGF RRWLQARYGD IAALNTAWGT
VFWSMEYRSF DQIDAPVGTV TEAHPAHRLD WRRFASDEVR AFNREQVEIL RELSPARPVS
HNFMGFFTEF DHHDVAADLD IATWDSYPLG FTQNFFLSAD EKARYARVGH PDIPGFHHDL
YRGMCASTRA DAPAHGRWWV MEQQPGPVNW ASWNTAPHDG MVRLWSWQAF AHGAEVVSYF
RWRQAPFAQE QMHTGLHRPD RSVDQGGVEA AQVGAELQAL STQMDLNAQG IVNRVALVFD
YDSLWMAQIQ PQGADYNPLE LQFRVYSALR QLGLDVDIVS PNAALAGYAL IVLPVQLHAS
AALVKALTQA AAAGAQIVLG PRAGAKTEVL AIPENLAPGA LSALAGVQVL RVASLPPGVQ
AVIRFEGDAG SVATAQRWRE DLALTGAQAE ALFDDDGRAA VTRLGSLRYV AGWLDADGWR
QLLMRAATDA GLSPQPLPAD LRVSRIGGLL LACNFSDRTL AYTPTSTPSS SSAAPLLGSA
TLAPRGIALW HLN
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