| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3242 |
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| Symbol | |
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| ID | 6161675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3595726 |
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| End bp | 3596679 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666016 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001792265 |
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| Protein GI | 171059916 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC CTGTTGTTCC TGTCCCGTTC GACCTTGCGC CGCGCCGGCG TGGCTGGGCG
GCGTTCAAGC ACGCCTTCGG GCCGCTGCGC CGGCTGGAGA CCACCACCGG TTGGCTGCTG
GTGCTGCCGG CGCTGATCGG CTTCGTGCTG TTCTATGCGA TGCCGACGCT GCGCGCGCTG
GAGATCAGCT TCACCGACTG GAACCTGCTG AGCGAGCCCA AGCCGGTCGG CTGGGCCAAC
TACGCCAAGA TGATCCAGGA CGGCAAGTTC TGGCACGGCA TGAAGCTGTC GCTCTACTAC
GTGGTCCTGA ACATCCCGCT GCAAATCGTG CTCGGGCTGT TCCTGGCGGT GGCGATGGAC
CGGCTGACGC GCTCGCTGTT CGTCAAGTCG GTGGTGCTGC TGCCCTACCT GCTGTCGAAC
GTGCTGGTGG CGCTGATGTG GGTCTGGCTG CTCGATCCGC TGCTGGGCGG CGTCAATCAC
CTGATCACCT TTCTCGGCAT GAGCCGCCAC CCGTTTTTCG CCAGCCCCGA CGAGGCGCTG
ATCACGGTCG CCGCGGTCAA CATCTGGCGC CACATGGGCC TGTGCGCGCT GCTGTTCCTG
GCCGGGCTGC AGGGCATTCC GCGCTATCTG TACGAGGCCG CCTCGCTCGA GGGCGCCAGC
GAGTGGCAGA TGTTCCGCCG CATCACGCTG CCGCTGCTGC GCCCGGTGAT GGTGTTCGTG
CTGGTCACCA GCGTGACGGG TTCGTTCCAG ATCTTCGACA CCGTGGCGGT GGCCACCAAC
GGCGGGCCGC TCGAATCGAC CCGGGTGATC GTGCACTACA TCGTGCAGAA CGCCTTCGGC
TTCTACAAGA TGGGCTACGC CTCGGCGATG TCGCTGACGC TGGGCATGGT GATGGTGCTC
TACACCATCG TGCAGATGCG CATCATGCGT TCGAACGAGA ACGACCTGGC CTGA
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| Protein sequence | MSDPVVPVPF DLAPRRRGWA AFKHAFGPLR RLETTTGWLL VLPALIGFVL FYAMPTLRAL
EISFTDWNLL SEPKPVGWAN YAKMIQDGKF WHGMKLSLYY VVLNIPLQIV LGLFLAVAMD
RLTRSLFVKS VVLLPYLLSN VLVALMWVWL LDPLLGGVNH LITFLGMSRH PFFASPDEAL
ITVAAVNIWR HMGLCALLFL AGLQGIPRYL YEAASLEGAS EWQMFRRITL PLLRPVMVFV
LVTSVTGSFQ IFDTVAVATN GGPLESTRVI VHYIVQNAFG FYKMGYASAM SLTLGMVMVL
YTIVQMRIMR SNENDLA
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