| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3228 |
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| Symbol | |
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| ID | 6161986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3579427 |
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| End bp | 3580962 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666002 |
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| Product | tryptophan halogenase |
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| Protein accession | YP_001792251 |
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| Protein GI | 171059902 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATC CTGAACGCCA TCTGCGCGAC ATCGTCATCA TCGGTGGTGG TTCGGCCGGC
TGGATGGCCG CGGCGGCCTT GTCCAGCGCG CTGTCGCAGC GCTGTCGTGT CACGCTGGTC
GAATCCGATG AGATCGGCAC CGTCGGTGTC GGCGAGGCGA CGATTCCTCC GATCAGGATC
TTCAACCAGA CCCTGGGCCT GGACGAGGCC GAGTTCCTCA AGCGCACCCA GGGCACCTTC
AAGCTCGGGA TCGAATTCGT CGACTGGGCC CGGCTCGGCC AGCGCTACTT CCATCCCTTC
GGCCCGCATG GCGTGCAGTT CGATCTGTCG CCGCAACACC AGTATTGGCT GCGCAGCCGA
GGGCGTGAAG GCATGCCCGG CATCGACGAA CATTCGATGG CCTGGGTGAT GGCCAGTCGG
GGCCGGTTCG ACAGGCCCTC GAGCGATCCG CGCTCGGTGC TGTCGACCTT CGACTATGCC
TACCACTTCG ACGCCACGCT CTACGCCCGC TACCTGCGCG AGGTGTCCGA GGCGCGCGGG
GTGCGGCGTA TCGAGGGCCA GGTCGTCGGT GTCGCCCTGC GCCCGACCGA CGGCTTCGTC
GCATCGGTGC GACTCGCCGA CGGGCGTGAC ATCGCCGGCG AGCTGTTCAT CGACTGCTCG
GGCTTTCGTG GCCTGCTGAT CGAGCAGACC CTGCACACCG GCTACGAGGA CTGGAGCCAC
TGGTTGCCCT GCGATCGCGC GATGGCGGTG CCCTGCAGTC ATCCTGAGTC GCCCGAGGGG
GGCGAGCTGA CGCCCTACAC GCGCTCGACC GCGCGCGCGG CCGGCTGGCA GTGGCGCATC
CCGCTGCAGC ACCGCATCGG CAACGGCCAT GTCTACAGCA GCCAGTTCCT CGATGACGAC
GAAGCGGCGG CGGTGCTGCT CGACAACCTC GACGGCGCGG CCCTGGCCGC ACCGCGAGCG
CTGCGTTTCA CCACCGGCCG GCGCAAGCAG TTCTGGAACC GCAATGTCGT GGCGCTGGGC
CTGGCCAGCG GCTTCATGGA ACCGCTGGAG TCGACCAGCC TGCACCTGGT GCAGTCGGGC
ATCTCGCGGC TGCTGGCGCT GTTTCCCGAT CGCGACTTCG ATCCGCTGAC GGCGGCCGAA
TACAACCGCA TCGGGGTGCA GGAGTTCGAG CGCATCCGCG ACTTCCTGAT CCTGCACTAC
AAGCTCACCG AGCGGGATGA CGCGCCGCTG TGGCGCTACT GCGCGGCGAT GCCGATACCC
GACACGCTGC AATACAAGAT CGAGCATTTC CGGCGCTACG GCCGCCTGGT CAGCGAGGGC
ATGGAGCTGT TCGGCAACGC CAGCTGGCTG TCGGTGCACA TCGGCCAGCT GAACTGGCCG
CAGCGCCACG ATCCCCTGGT CGATCTGCGC GACGTCGATG GCGATGCCGT GCTGGCGCGG
CTGCGCCAGG CCATGGTGAG TGCCGCCCAC GGCCTGCCCG GCCATGCCGA TTTCATCCGG
CGCCACTGCG CCGCCCGTGC GGCCTGCCCA GCCTAG
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| Protein sequence | MSNPERHLRD IVIIGGGSAG WMAAAALSSA LSQRCRVTLV ESDEIGTVGV GEATIPPIRI
FNQTLGLDEA EFLKRTQGTF KLGIEFVDWA RLGQRYFHPF GPHGVQFDLS PQHQYWLRSR
GREGMPGIDE HSMAWVMASR GRFDRPSSDP RSVLSTFDYA YHFDATLYAR YLREVSEARG
VRRIEGQVVG VALRPTDGFV ASVRLADGRD IAGELFIDCS GFRGLLIEQT LHTGYEDWSH
WLPCDRAMAV PCSHPESPEG GELTPYTRST ARAAGWQWRI PLQHRIGNGH VYSSQFLDDD
EAAAVLLDNL DGAALAAPRA LRFTTGRRKQ FWNRNVVALG LASGFMEPLE STSLHLVQSG
ISRLLALFPD RDFDPLTAAE YNRIGVQEFE RIRDFLILHY KLTERDDAPL WRYCAAMPIP
DTLQYKIEHF RRYGRLVSEG MELFGNASWL SVHIGQLNWP QRHDPLVDLR DVDGDAVLAR
LRQAMVSAAH GLPGHADFIR RHCAARAACP A
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