| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3206 |
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| Symbol | |
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| ID | 6162331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3550440 |
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| End bp | 3551549 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665980 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001792229 |
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| Protein GI | 171059880 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCCC AAACTCCTGA CTACCAGGCA CAGGCCGCCG CGGCCGGCAG CACCGCATCC
ACATCGTCCG GCGCCCGCCG CCTGCGCGTG GGCGTGATCG GACTGGGCAT CGGCCGCATG
CACATCGAAG GCTGGCGCCA GCACCCGGAC GTCGACGTGG TGGCGATCAC CGATGCCGAT
CCGGCGCGGC TCGAAACCGT CGGCGAGCAG TTCGCAATCG CCGCCCGCTA CACCGGCGCC
GCCGAGATGC TGGCCGGCGA GCAGCTCGAT GTCGTCAGCA TCTGCACGCC CAACAAGTTT
CACAAGGAAC TGACGCTGGC CGCCTTCGCC GCCGGCTGCC ACGTGCTGTG CGAGAAGCCG
ATGGCGATGA ACGCCGACGA GGGCCGCGAG ATGCTGGCTG CGTCCAAGCG TGCGGGCAAG
CGGCTGATGA TCAACTTCAG CTACCGCTTC AGCGCCCAGT CGCGGGCGCT GAAAGCGCAG
GTCGACACCG GCCAGTTCGG CGAGTTCTAT TTCGGCCGCA CGGTCTGGCA TCGGCGGCGC
GGCATGCCGG GTTTCGGCGG CTGGTTCGGC CAGAAGGCGC TGGCCGGCGG CGGGCCGTTG
ATCGACCTGG GCGTGCACCG GCTCGACCTG GCGCTGTGGC TGATGGGCTA TCCGAAGCCG
ACCTGGGTGC TGGGCAACAC CTACGACCCG ATCGCGCGTG AAGCCGCCAA GGCGTCGGGC
AAGGCCTTCG ATGTCGAGGA CCTGGCCGCC GCCTTCATCA AGTTCGAGAA CGGCGCCACG
CTGGTGCTCG AAGCCTCGTG GGCCGCGCAC ATCCAGGAGG CCGAGCTGAT GGAGACGCGC
CTGCTCGGCA CCAAGGCCGG GCTGCTGCAG AAGAACCTGA ACGAGGGTTA CCAGTTCGAC
GCCCACATCT TCAGCGACAG CGCCGGCGCA CAGATCGACA CCCACGTGCA CCCGCCCACC
ACGCCCGCAA AATCGGCGAT GCACGACTAC GCCGAGGCGA TCCTGACCGA GCAGCCGCAC
CCCGCCCCGG GCGAAGAAGG CCTGATCGTG ATGGAGATCC TCGACGCGGT CTACGAAAGC
GCCCGCACCG GCGCGCCGGT GCAGCTCTGA
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| Protein sequence | MAAQTPDYQA QAAAAGSTAS TSSGARRLRV GVIGLGIGRM HIEGWRQHPD VDVVAITDAD
PARLETVGEQ FAIAARYTGA AEMLAGEQLD VVSICTPNKF HKELTLAAFA AGCHVLCEKP
MAMNADEGRE MLAASKRAGK RLMINFSYRF SAQSRALKAQ VDTGQFGEFY FGRTVWHRRR
GMPGFGGWFG QKALAGGGPL IDLGVHRLDL ALWLMGYPKP TWVLGNTYDP IAREAAKASG
KAFDVEDLAA AFIKFENGAT LVLEASWAAH IQEAELMETR LLGTKAGLLQ KNLNEGYQFD
AHIFSDSAGA QIDTHVHPPT TPAKSAMHDY AEAILTEQPH PAPGEEGLIV MEILDAVYES
ARTGAPVQL
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