| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3202 |
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| Symbol | |
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| ID | 6162327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3545942 |
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| End bp | 3546676 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665976 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_001792225 |
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| Protein GI | 171059876 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGG CTCATCCTGA TCTCGCGCAC AGCCTTCGCC AACTGCGCGA GCGCGTGCTC
GAAGCCAACC TCGCGCTGCC GCGCCACGGC CTCGTCACCT TCACCTGGGG CAACGTGAGT
GGCTATGACC CCGAGCTGGA GCTGGTGGCG ATCAAGCCCA GCGGCGTCAG CTACGAGCGC
ATGGCGCTGG CCGACATCGT CGTGCTCGAC CTGCAGGGCC GCGTGGTCGA AGGCGAGCTC
AAGCCGTCGT CGGACACGCC CACGCACCTG CATCTTTACC GCACCTGGCC GCAGCTGCGC
GGCATCGTGC ACACGCATTC GACCCACGCC ACCAGCTGGG CGCAGGCCGG CCGCGCGATC
CCGGCGATGG GCACGACGCA TGCCGACTAT TTCCACGGCG AGGTGCCATG CACGCGGGCG
CTGAGCCGCG AAGAAGTCGA GGGTGACTAC GAGCTCAACA CCGGCCACGT GATCGTCGAG
ACCGTGAGCG CGCTGCACGA CGGCAACCCG CTGGCGCGCC CCGGCATCCT GGTGGCCGAA
CACGCCCCGT TCGCCTGGGG CACCAGCCCC GACCAGGCCG TGCACAACGC GGTGGTGATG
GAAGAGGTGG CGCGCATGGC GCTTTACACC CACATGCTGA ACCCGCAACG CGGCCCGATC
GAACAGCACC TGCTCGACAA GCACTACCTG CGCAAACACG GCAAGAACGC CTACTACGGT
CAGTCGAAAA GCTGA
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| Protein sequence | MNAAHPDLAH SLRQLRERVL EANLALPRHG LVTFTWGNVS GYDPELELVA IKPSGVSYER
MALADIVVLD LQGRVVEGEL KPSSDTPTHL HLYRTWPQLR GIVHTHSTHA TSWAQAGRAI
PAMGTTHADY FHGEVPCTRA LSREEVEGDY ELNTGHVIVE TVSALHDGNP LARPGILVAE
HAPFAWGTSP DQAVHNAVVM EEVARMALYT HMLNPQRGPI EQHLLDKHYL RKHGKNAYYG
QSKS
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