| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3179 |
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| Symbol | |
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| ID | 6161601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3513822 |
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| End bp | 3514919 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665954 |
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| Product | heat shock protein DnaJ domain-containing protein |
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| Protein accession | YP_001792203 |
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| Protein GI | 171059854 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000698212 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAACATG ACATCGACAA GGCGTTCGCC GAGCTGGGCC TGACCCCCGA CGCGACCGAA
CGCGAGGTCA AGGCGGCCTG GCGCCGGCTG GTCTCGCGGT GGCACCCGGA TCGCAACAAC
GGCGCCGACG CGGTGGCCAG GATGCAGCGC ATCAACCGCG CCCTCGAAGC CATCCGGCAG
GCCGGCGCAC GCAAGGCCGC GGCGCCGGGC GGCGCTGGCG ACACGGCCCA GGCGCCTGCT
GCCGCCGCCC GATCCCGTGC AGGCGAGCCA TCCGACGACC GTGCAACGTC GGCCGGCGAC
GATCCCGAGG CACCGGTGCG GACGCTGCAC CGCCGGGTCA GGCTGACGCT CGAGGAAGCG
GCTTTCGGCT GCACCAAGGT CTTGCGCGGC AAGGTCACGG ACGATTGCCC GGACTGCAAC
GGCGCGGGCT ATCGCGTGCT GGGCGGGCAC TGCCCGCAGT GCCACGGCTC GGGTGCGATC
CGCCAGCCGA TGTGGTTCAG TTGGGTCGGC GTGCCGGCCG AGTGCGACGC CTGCCATGGT
GGCGGCATCG CGCGCCAGGC CTGCGTGGCC TGCGCCGGCA GCGGCAAGAC CGAAACCCGG
CGCTACAAGG TGACGGTGCG TTTCCCGCAA GGCGTGCGCG ATGGCGACGT GCTCGGCGTG
GCCGGGCGCC GCGGCAGGCC GGACGCGCCA CCCGGCGACC TGAGCATCCG CGTCGAGGTG
CTGCCCCATG CGCTGTTCCA GCTCGACCCG GACGGCACGG TGCGATGCGA CATGCCGGTC
GACGGTTTCG CGTGGCTGGC CAACCGCACC CTCGCCGTGC CCACCCTCGG CGGCCTGCAG
ACCCTCCAGC TGCAGCGCGA CCAGGTGGTC CACCGGCTGG TGGGGCAGGG CTTTCCGGTC
GAACGCCGCG GTGCGCGCGG CGATCAGCTG ATCACCCTGC AGCCGGTCTT CCCGCAGCGC
ATGACGGCGG ACCAGCAGAT CCTGATCGAC CAGCTGATCG CCACCACGAC CGGCACCGAC
GGCAAGCCGT CGGACGCACG GCTGCGGGGG TGGAGCGAGG CGCTGGGGGC GTGGAAAGGT
CAGCAGGCGC CGGGCTGA
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| Protein sequence | MEHDIDKAFA ELGLTPDATE REVKAAWRRL VSRWHPDRNN GADAVARMQR INRALEAIRQ
AGARKAAAPG GAGDTAQAPA AAARSRAGEP SDDRATSAGD DPEAPVRTLH RRVRLTLEEA
AFGCTKVLRG KVTDDCPDCN GAGYRVLGGH CPQCHGSGAI RQPMWFSWVG VPAECDACHG
GGIARQACVA CAGSGKTETR RYKVTVRFPQ GVRDGDVLGV AGRRGRPDAP PGDLSIRVEV
LPHALFQLDP DGTVRCDMPV DGFAWLANRT LAVPTLGGLQ TLQLQRDQVV HRLVGQGFPV
ERRGARGDQL ITLQPVFPQR MTADQQILID QLIATTTGTD GKPSDARLRG WSEALGAWKG
QQAPG
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