Gene Lcho_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3146 
Symbol 
ID6162905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3474294 
End bp3474824 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content68% 
IMG OID641665921 
Productdihydroneopterin aldolase 
Protein accessionYP_001792171 
Protein GI171059822 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCC TGCCCGCCTT GCTCGATTCC CTGCCGCCAC AGCCGCACGG CCACGCGCCG 
GCGGCCGCGC CGATGGACCT GATCTTCATC AGCGGCTACA CCGGTCAGAC GGTGATCGGC 
ATCCACGAAT CCGAGCTGCA CCACACCCAG CCGCTGGTGA TCGACATCCA CGCCGGCCTG 
CCGCGCGCGC GGGCCTGCGA CACCGATCAC ATCGGCGACA CCATCGATTA CGGCGTGGTG 
CGCAACCGCC TCGACGCGCT GATGCACGAC CACGGCGTGA CGCTGCTCGA AGCGCTGGCC 
GAACGCATCG CACGCATGCT GCTGATCGAC TTTGGCGCGG CGTGGGTGCG CGTCAAGGTG 
GTCAAGCCGC GCAAGTTCGA CAACGTCGAC GCGGTGGGCG TGCAGATCGA GCGTTGCCGC 
GCCGACCTGC GTGACGTGCC GATGGCATCG ACATCAGCTG CCGCATCGAC CCCACGCAGC 
GCGCAGATCC TGAGCTGGAT GGGCTCGGGC CTGGTGCCGC AGGATCGGTA A
 
Protein sequence
MSALPALLDS LPPQPHGHAP AAAPMDLIFI SGYTGQTVIG IHESELHHTQ PLVIDIHAGL 
PRARACDTDH IGDTIDYGVV RNRLDALMHD HGVTLLEALA ERIARMLLID FGAAWVRVKV 
VKPRKFDNVD AVGVQIERCR ADLRDVPMAS TSAAASTPRS AQILSWMGSG LVPQDR