| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3142 |
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| Symbol | |
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| ID | 6162901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3469345 |
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| End bp | 3469932 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665917 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792167 |
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| Protein GI | 171059818 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2457] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATG ACGTGATCTT CGAGACCGTC GTGACGACGC TCTCTGCCGA AGGAAAACTG
CACGTCGCGC CGATGGGCGT GCGCTACCGC GATGACCGCG TGGTGGTGAT GCCCTTCAAA
CCCTCGACCA CGCTCGACAA CATCCTGGCG CGGCGCAGCG CGGTGCTCAA CGTCATCACC
GACACGCGCG TGTTCGCCGG CTGCGTGACC GGCCGGCGCG ACTGGCCGAC CGAGCCGGTG
CCCGCCATCG ACAGCCGGCG CCTGACCTGC GCGCTGCGCC ACCTGGCGCT GCAACTCGAA
CACGTCAGCG ACGACCCGCA GCGCCCGGTG CTGACAATGC GCGCAGTCGA GGACGTGACG
CACGCGCCAT TCTTCGGCTT CAACCGCGCC CAGGCCGCCG TCATCGAAGG CGCGGTGCTG
GTCAGCCGCC TGCACATGCT GAGTGCCGAA CGCATCGACC GAGAAATGAG CTACCTGCAG
ATCGCCATCG ACAAGACCGC CAGCGCGGCC GAACACGAAG CCTGGGGCTG GCTGCAGCAG
GCCATCGCCC GCCATCGCGC TGCCGCGCCA GCGACAGGAG CAGCGTGA
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| Protein sequence | MTNDVIFETV VTTLSAEGKL HVAPMGVRYR DDRVVVMPFK PSTTLDNILA RRSAVLNVIT
DTRVFAGCVT GRRDWPTEPV PAIDSRRLTC ALRHLALQLE HVSDDPQRPV LTMRAVEDVT
HAPFFGFNRA QAAVIEGAVL VSRLHMLSAE RIDREMSYLQ IAIDKTASAA EHEAWGWLQQ
AIARHRAAAP ATGAA
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