Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3141 |
Symbol | |
ID | 6162900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3468587 |
End bp | 3469345 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641665916 |
Product | hypothetical protein |
Protein accession | YP_001792166 |
Protein GI | 171059817 |
COG category | [S] Function unknown |
COG ID | [COG1891] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGCAC GTCCGGCACT GCCTGCGGCG CGGCTCGACG AGGCCGGGCC CGTCACCACG TTGCGCGCAC TGGTCAGCGT GCGCAACTTG GCCGAGGCGC GACTCGCCGC GCAGGCCCGC GTCGGTTTCA TCGACCTGAA GGAACCCAAC GACGGCGCGC TCGGTGGCCT GGCGGTGGCA CACATCGCGC AGATCGTGCG TGCGCTGCGC GAGGTGGCGC CCGGCGTGCC GATCAGCGCC ACCATCGGCG ACTGGCCGGC GCACGCGCTG GCCGAGATCC GCGAGCGTGT GCGGCAGGTG GCAGCGTGTG GGGTCGATCA CGTCAAGGTC GGCATCGATC CGGCCTCGGC CAGCGGGCCT GAAGCGCTGA TGGCCTTGGT CGAGGAACTC GGCCGCCTCG ACCGCGAAGG CCTGCCGCTG GTGCCGGTGC TGATCGCCGA CAACGGCGTC GAGCCGGCGC TGCTGCAGCG TGTCTGTGCC CAGCGCTTTT TTGCCGTGAT GCTCGACACC GCCGACAAGC GCGGCGGCTC CTTGTTGCAG CGCCTGGGTG CCGTCGAGCT GGCCGGTTTG ATCGCGCAGG TGCGTGCACA CGGCAGCCTG ATCGGCCTGG CCGGCGCGCT GCAGTTGTGC GATCTGCCGG CCTTGCGTCG GCTGGCGCCG GACTTCGCCG GCTTCCGCTC CGCCGTGTGC GTGGGCGATC GGCGCGAGGG GATGGATGCG CGGCTGCTGG CGCAACTGGT CGAGGTGCTG GGCGCTTGA
|
Protein sequence | MGARPALPAA RLDEAGPVTT LRALVSVRNL AEARLAAQAR VGFIDLKEPN DGALGGLAVA HIAQIVRALR EVAPGVPISA TIGDWPAHAL AEIRERVRQV AACGVDHVKV GIDPASASGP EALMALVEEL GRLDREGLPL VPVLIADNGV EPALLQRVCA QRFFAVMLDT ADKRGGSLLQ RLGAVELAGL IAQVRAHGSL IGLAGALQLC DLPALRRLAP DFAGFRSAVC VGDRREGMDA RLLAQLVEVL GA
|
| |