| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3104 |
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| Symbol | |
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| ID | 6161713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3436924 |
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| End bp | 3437817 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665879 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792129 |
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| Protein GI | 171059780 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCTG AGACGCGCCT GCGCTCGCGC GGCTTCACGC TGGTCGAGCT GATCCTGGTG
ATCGTGATCG GCGGCGTGCT GGCGGCCACG CTGACGGTGT TCATGCGCCC GGCGCTCGAC
AGCTACCTGG CCACCCGCTC GCGCGCCGAT CTGGTCGCCC AGGCGGACAC CGCGCTGCGC
CGCATGGTGC GCGACCTGCG GGTGGCGGTG CCGAACTCGA TCCGCATCCC CAACAGCCAG
TGCTTCGAGC TGCTGCCCAC CGCGAGCGGC GGGCGCTACC GCATGGAGCC CGACACCGTC
AACGACAGCG GGCCGGGCTG CACACCGGGC GCCGACTGCT CGGCCCCGCT CGACACCACC
CAGCCCGTCA CGCTGTTCGA CGTGCTGACG CCGCTGGCCG CCACGCCGGC CGTCGGCGAC
GCGGTGGTGA TCGGCAACCA GACGCCCGAG CAGGTCTACG GCGGCAGCAA CCGCGCCACC
ATCACGCAGG TGAGCACGCC CGACGCGCGC TACGGCCGGC ACCGCATCGG CATCGCCAGC
ACGCAGTTCC CGAGCGGCTA CGACGGCGGC CGCTTCGTCA TCGTGCCGGC CGCCCAGGGG
CCGGTGTTCT ACGTCTGCAG CGGCGCCGAC GGCAGCACCG ACGCGCAGGG CAACGGCCGC
GGCACGCTGG TGCGGCTGAT GGGCTACGGC TACAACGCCG GCTATCCGGC GAGCTGCCCT
TCGGCCGCCA CCGGCCACGT GCTGGCCAGC CATGTGCTGA GCTGCCAGTT CGTGCACGAC
CCCAACCAGG GTGCGACGCA GCAGAACGGC TTCGTCTGGC TGCAGCTGGT GCTGGCGCGC
GCCGGCGAGC AGACCACGCT CGCCTTCGGC GCGCATGTGG ACAACGCGCC ATGA
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| Protein sequence | MRPETRLRSR GFTLVELILV IVIGGVLAAT LTVFMRPALD SYLATRSRAD LVAQADTALR
RMVRDLRVAV PNSIRIPNSQ CFELLPTASG GRYRMEPDTV NDSGPGCTPG ADCSAPLDTT
QPVTLFDVLT PLAATPAVGD AVVIGNQTPE QVYGGSNRAT ITQVSTPDAR YGRHRIGIAS
TQFPSGYDGG RFVIVPAAQG PVFYVCSGAD GSTDAQGNGR GTLVRLMGYG YNAGYPASCP
SAATGHVLAS HVLSCQFVHD PNQGATQQNG FVWLQLVLAR AGEQTTLAFG AHVDNAP
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