| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3042 |
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| Symbol | |
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| ID | 6161569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3359423 |
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| End bp | 3360508 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665817 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792067 |
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| Protein GI | 171059718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3500] Phage protein D |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000069589 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGAGA CCACCCTCAG CCGCACGGCG ATCTTCAGCG CCCGCCCGAC GCTGCGCATC
GCCGACCAGC CCGACGAGCG GCTGTCGACG CTGATGACCG CGCTGAAGAT GGACGAGTCC
GAAGGCGGCC TGAGCGCACT CGAACTGCAC CTGACCAACT GGGTGGCCAC CCCCGAGGGC
GGCGCCGAGC TGGCCTTCAA CGCCGACAGC AGCCTGCGCC TGGGCGCGGA CCTGGCGGTC
TATTGCGGTG ACGAGGCAAG CCCGCGCGAA CTCTTCAAAG GCAAGGTCAC GGCACTGGAG
ATGGTCTGCA ACTACGGCAC ACCGCCCGAA CTCGTGGTGC TGGCCGAGGA CGGCCTGAAC
GCCGCGCGAC GCAACCGCCG CAGCGAGGTC TACACCGACC AGAGCCCGGC CGACGTGGTG
CGCACGATCG GCGCTCGCAA CGGCCTCACG GTCAACGTCA ACGGCCTCGC CAGCCCGACC
GGCACCTGGG TGCAGCTCGA CGAAACCGAC CTCGGTTTTC TGCGCCGGCT GCTGGCGCGT
TTTGACGCCG ACCTGCAAGT GGTCGGCAGC GAACTGCAGG TGGCGGCCCG CCAGGATGCC
GCACGCGGCG AGATCGAGCT GACGCTCAAC AGCCAGCTGG CCCGCGTGCG CATCTGCGCC
GATCTGGCGC ACCAGGCCAG CGCCGTCAGC GTGGCCGGCT GGAATGCGGG CGACGGCAGC
GCCGTCAGCA GCGAGGCGAG CAGCCTGTCG AGCACCGGGC CGGGCTCGGG CCGCAGCGGC
ATCGACTGGG CGAAAGATGT CTTTGGCGAG CGCAGCGAGC ACCTCGCCAC ACCCGCGGTC
GGCAGCAACG ACGAGGCCCG CGCAGTCGCG CAAGCCGCGC TTGATCAGCG CTGCCGCCGC
TTCGTGCGTG CCGAGGGGCT GTCCGAAGGC AACGCGCAGC TGCGGGTGGG CAGCACCGTG
AAGCTGGTCG GCATCTCGGC GCAGTTCGAC AACCGCTACT ACGTGGTGCG CACCCGCCAC
CTGTTCGACA TGGAACAGGG CTACCGCACC GAATTCAGCG CCGAGTGCGC CTACCTCGGC
GGCTGA
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| Protein sequence | MSETTLSRTA IFSARPTLRI ADQPDERLST LMTALKMDES EGGLSALELH LTNWVATPEG
GAELAFNADS SLRLGADLAV YCGDEASPRE LFKGKVTALE MVCNYGTPPE LVVLAEDGLN
AARRNRRSEV YTDQSPADVV RTIGARNGLT VNVNGLASPT GTWVQLDETD LGFLRRLLAR
FDADLQVVGS ELQVAARQDA ARGEIELTLN SQLARVRICA DLAHQASAVS VAGWNAGDGS
AVSSEASSLS STGPGSGRSG IDWAKDVFGE RSEHLATPAV GSNDEARAVA QAALDQRCRR
FVRAEGLSEG NAQLRVGSTV KLVGISAQFD NRYYVVRTRH LFDMEQGYRT EFSAECAYLG
G
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