| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2968 |
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| Symbol | |
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| ID | 6160449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3270868 |
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| End bp | 3272601 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665744 |
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| Product | NAD+ synthetase |
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| Protein accession | YP_001791995 |
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| Protein GI | 171059646 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTT CGACTCCCGT GTCGTCCGCG CTGCCGGCTG CTGCCGCCCA GGTGGCCCTG
CTGCAAATCA ATCCGACCGT CGGCGACCTG GCCGGCAACC TGCGCCGCAT CGTCGAGGCC
GCCCGTGCCG CCCACGCGCA GGGCGCCAGC GTCGCGGTGG CGCCCGAACT GGCCTTGTGC
GGCTATCCGC CCGAAGACCT GCTGCTGCGC CCGGCCTTCC TGGCCGCCTG CGAACAGGCG
CTGGCCGACT GCGCCGCGGC CCTCGCCGAT CTGGCCGGTT TCCACCTCGT GCTGGGCCAC
CCGCGTGCCT TGTCCACGCT CGCCGCTGCG GGCGGGTCGG ATGTTCGCAC GCATGATCGT
TCACGTTCGT GGGCGCTGCA GGGCTGCCTG AACATGGCCT CGGTGCTGAG CGGCGGACGG
GTGATCGCCA GCTACGCCAA GCGCGAGCTG CCGAACTACC AGGTGTTCGA CGAGCGCCGC
TATTTCGTCA GCGGCCGCGA CGCCGGCCTG GACGCGCTGG TGTTCGAGGC CGCCGGCCGG
CGTTTCGGCG TGCTGATCTG CGAGGACGCC TGGTTCGACG AGCCCGCCGC CGCCGCCCGC
GCCGCCGGTG CGCAGGTGCT GCTGGTGCTC AACGCCTCGC CGTTCCACCT CGGCAAGCAG
GAAGAGCGTG AGCAGCGCAT GGCCGAGCGC GCCCGCCACG CCGGCCTGCC GCTGCTGTAT
TCGCATCTGG TGGGCGCGCA GGACGAGGTG GTGTTCGACG GCGCCTCGTT CGCGCTGCAG
GCCGACGGCC GCCTGGCCGC GCGCGCGCCG ATGTTCGCCG AGCACACGCT GATGCTCACG
CTCGACGCCG CGGGCGCCGT GAGCGGCGCC TGTGCCGAGC TGCCGTCGCT GGAGGCGCAG
GCCTGGGGCG CGCTGACCAC CGGCGTGCGC GACTACCTCG GCAAGAACGG TTTCCCCGGC
GCCATCATCG GCCTGTCGGG TGGCATCGAT TCGGCGCTGG TGCTGGCGAT CGCGGTCGAC
GCGATCGGCG CCGACAAGAT CCATTGCGTG ATGATGCCCA GCCCCTACAC GGCCGAGATC
TCGTGGGTGG ATGCGCGTGA CATGGCGCAG CGCCTGGGCG TGCGCTACGA CGAGCTCAGC
ATCGTGCCGA TGTTCGACGC CTTCCGCGCC ACGCTGGCCG GGCAGTTCGA GGGCCGCGCC
GAAGACACCA CCGAAGAGAA CATCCAGGCC CGCATCCGCG GCACGCTGCT GATGGCGCTG
TCCAACAAGT TCGGCTCGAT CGTGCTGACC ACCGGCAACA AGAGCGAGAT GGCGACCGGC
TACTGCACGC TCTACGGCGA CATGGCCGGC GGCTACGCGG TCATCAAGGA CGTCGCCAAG
ACGCTGGTCT ACCGGCTGGC GCAGTGGCGC AACCGCCAGG GCCCGATCGA GGTGATCCCC
GAACGCATCA TCACCCGGCC GCCCTCGGCC GAGCTGCGCC CCGACCAGAC CGACCAGGAC
AGCCTGCCGC CCTACGAGGT GCTCGACGCG ATCCTGTCGA TGTACATGGA AGAAGACCGC
TCGATCGAGC AGATCGTCGC CGCAGGCTTT GCACCGGCCG ACGTCGAGCG CGTGACGCGG
CTCATCAAGC TCAACGAGTA CAAGCGGCGC CAGGCGCCGG TGGGGCTGCG CATCACGCAC
CGCGGCTTCG GGCGCGACTG GCGTTACCCG ATCACTTCCA AGTTCCGCGC CTGA
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| Protein sequence | MSSSTPVSSA LPAAAAQVAL LQINPTVGDL AGNLRRIVEA ARAAHAQGAS VAVAPELALC
GYPPEDLLLR PAFLAACEQA LADCAAALAD LAGFHLVLGH PRALSTLAAA GGSDVRTHDR
SRSWALQGCL NMASVLSGGR VIASYAKREL PNYQVFDERR YFVSGRDAGL DALVFEAAGR
RFGVLICEDA WFDEPAAAAR AAGAQVLLVL NASPFHLGKQ EEREQRMAER ARHAGLPLLY
SHLVGAQDEV VFDGASFALQ ADGRLAARAP MFAEHTLMLT LDAAGAVSGA CAELPSLEAQ
AWGALTTGVR DYLGKNGFPG AIIGLSGGID SALVLAIAVD AIGADKIHCV MMPSPYTAEI
SWVDARDMAQ RLGVRYDELS IVPMFDAFRA TLAGQFEGRA EDTTEENIQA RIRGTLLMAL
SNKFGSIVLT TGNKSEMATG YCTLYGDMAG GYAVIKDVAK TLVYRLAQWR NRQGPIEVIP
ERIITRPPSA ELRPDQTDQD SLPPYEVLDA ILSMYMEEDR SIEQIVAAGF APADVERVTR
LIKLNEYKRR QAPVGLRITH RGFGRDWRYP ITSKFRA
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