| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2944 |
|---|
| Symbol | |
|---|
| ID | 6159737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 3245412 |
|---|
| End bp | 3246812 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641665723 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001791974 |
|---|
| Protein GI | 171059625 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CCGCCAACCG CCTGCTCCTG AAAATCGACG CCCTGCGACT GGGCATGTTC
GTCCAGCTCG ACCTCGGCTG GATGAATCAC CCGTTCCCGC GCAGCCGCTT CAAGCTCGAC
GATCCGGCGC AGATCGCCAC CCTGCGTCAG CTCGGCGTGC TGGAAGTGCT GGTGCGACCG
GACCTGAGCG ATCCGGTGGC GTTTGCCGAC AGCGCCCACG ACGCCGGCCA CGTCGCGGCT
GCCGAGCCGG CGCCGTCTGG CGACACGGCC GCTGCCATCC CGACCCCCGC AGCAGCCACG
GCTGCCGCCG ACAGCAGCCC GCTGCGCCGG CGCATGCTCG AGCCGTGCTC GCAGCGCGAG
CCGCTGCGTG CCGGCGACCC GACGCTGGCG ATGCGGCGCG CGCAGCTCGG CCGCGAACGC
GACAGCCTGG CACGCAGCGA ACGCCTGCAC GCGCAGGCCA GCCGCGCCTG GCTCGGCATC
ACCCGCGACG CGGTCAACAA CCCGACCGGC GCGCACCACG CTGCGCTGCT GCTGGCCGAC
GGGCTGGTCG ACGAACTGCT GGGCGACGAC GACACCACCA TCCGCGTGCT CAGCGAAGCC
GCCGGCACCG CCGCTTCGCA GCATGCGCTC AACGTGACGG TGCTGTCGCT GCTGCTCGGC
CGCAGCCTGG GCCTGGACGA AGCGACGATG CAGACCCTGG CCCTGGGCGC GCTGCTGCAC
GACATCGGCA AGCTGCTGCT GCCCGACCAC CTGCGCAACG CCGACGCCAG CAACGGCGCG
CTGCTGCTGC GTGAACGCCG CGAACACGTC GCCCAGGGCG CGCGCCTCGG CCTGGCGATG
GGCCTGCAGG CCGCGGCGCT GCAGGTGATC AGCCAGCACC ACGAGCAGCA CGACGGCAGC
GGCCTGCCGC TGGGCCTGGC GGGCAACGCG ATCGCGATGC CCGCGCGCGT GGTCGCGCTG
GTCGACACCT ACGACCGGCT GTGCAACCCG ATGGCCGGCC AGCCGCTGCG CACCCCGCAC
GAGGCGCAGG CGCTGCTGTT CGCGCACATG CGCAAGCAGC TCGATCCGGC CGTGCTGGCC
GCGTTCATCA AGCTGCTGGG CGTCTACCCG CCCGGCTCGG TGGTGCAGCT CAACGACGAG
CGGCTGGCGC TGGTGGTGGC GGTGCATCCG CAGCGCCCGC TCAAGCCGAG CGTGGTGGTG
CACGACCCGC GCGTGCCGCG CGACGAGGCG CTGATCGTGC ACCTGCAGCA AGAGCCCGGC
CTGGGCATCC GCCGCAGCCT GCACCCGCAG CACCTGCCGC GGGCGGTGGT GGACTACCTG
TCGCCCCGCG AGCGCGTCAG CTACTACTTC GCCCACGGCC TCGAACCGGC GGTGACAGCC
ACACACGGCC AGGCGGCGTG A
|
|---|
| Protein sequence | MTATANRLLL KIDALRLGMF VQLDLGWMNH PFPRSRFKLD DPAQIATLRQ LGVLEVLVRP
DLSDPVAFAD SAHDAGHVAA AEPAPSGDTA AAIPTPAAAT AAADSSPLRR RMLEPCSQRE
PLRAGDPTLA MRRAQLGRER DSLARSERLH AQASRAWLGI TRDAVNNPTG AHHAALLLAD
GLVDELLGDD DTTIRVLSEA AGTAASQHAL NVTVLSLLLG RSLGLDEATM QTLALGALLH
DIGKLLLPDH LRNADASNGA LLLRERREHV AQGARLGLAM GLQAAALQVI SQHHEQHDGS
GLPLGLAGNA IAMPARVVAL VDTYDRLCNP MAGQPLRTPH EAQALLFAHM RKQLDPAVLA
AFIKLLGVYP PGSVVQLNDE RLALVVAVHP QRPLKPSVVV HDPRVPRDEA LIVHLQQEPG
LGIRRSLHPQ HLPRAVVDYL SPRERVSYYF AHGLEPAVTA THGQAA
|
|---|
| |