Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2862 |
Symbol | |
ID | 6159963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3150833 |
End bp | 3152071 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641665641 |
Product | GTP-binding proten HflX |
Protein accession | YP_001791892 |
Protein GI | 171059543 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTGCAT CGGATGTCAC CCCCCGCCCA CGTGCCTTGC TCGTGGGCGT GGATCTGGGG GTCGGTTCTT CATTTGATCC CACGCTGGAT GAGCTGGCGT TGCTGGCCGA GTCGGCTGGC GACGAAGCCG TCGCGCGCCT GATCGCCCGC CGCAAGGCGC CCGATCCGGC CTTGTTCGTC GGCTCGGGCA AGGCCGACGA GATCAAGGAG CTGATCGCGC TCCATCAGGC CGATTGCGTC ATCTTCGACC AGGCGATCGG CCCGGCCCAG CAGCGCAATC TCGAGCGCCA TCTCGGTGTC GAGGTGCTCG ATCGCACCGG CCTGATCCTC GAGATCTTTG CCGCCCGCGC GCGCAGCCAC GAGGGCAAGC TGCAGGTCGA GCTGGCCCGG CTGCAATACC TTTCGACACG GCTCGTCCGC CGCTGGTCGC ACCTGGAGCG CCAGCGCGGT GGTGTCGGCC TGCGCGGTGG CCCGGGTGAA ACCCAGATCG AACTCGATCG CCGCATGATC GACGTGCGCA TCAAGTCGGT CAAGGAACGC CTCGAGAAGG TCAAGCGCCA GCGCGGCACG CAACGCAAGT CGCGCGAGCG GCATGGCACG TTCCGGGTCT CGCTGGTCGG CTACACCAAT GCGGGCAAGA GCACGCTGTT CAATGTGCTG GTGAAGGCGC AGGCCTACGC GGCCGATCAG CTCTTCGCCA CGCTCGACAC CACCACGCGG CAGATGTACC TCGAAGATGC CAGGCGCAGC GTGTCGCTAT CCGACACGGT GGGGTTCATT CGCGATCTGC CGCACAGCCT CGTGGAGGCT TTTCAGGCCA CGCTGCAGGA GTCTGCCGAC TCCGACCTGC TGCTGCACGT GGTCGATGCG GCCAGTCCGA CCTGGCTTGA ACAGCTGCAT GAAGTGCAGC GCGTTCTGCG CGAGATCGGT GCCGAGTCGG TGCCGCAGTT CCTGGTCTTC AACAAGATCG ATCTTCTCGA GGATGACGCG CTCCCGCGTG TGATGTGCGA TCAGTACGAG ATCGAGCCGG GACGGGTCGT GTCCCGATTC TTCATCAGCG CAGCGGCCAA CGAAGGCCTG GGCGCATTGC GCCGCGCGAT CGCCCAGGCT TCTCTCGACG CCGACGCCCG TCGCGGCCAG CCTCTGGCCG ATGTCCGTTT TGATCCCGTG CCCCCTGATG CGGAACCTAT GGCGCCAGAG GCATCCAATG ATGTCCCGGC GCACCCGCAC GAGGCTTGA
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Protein sequence | MTASDVTPRP RALLVGVDLG VGSSFDPTLD ELALLAESAG DEAVARLIAR RKAPDPALFV GSGKADEIKE LIALHQADCV IFDQAIGPAQ QRNLERHLGV EVLDRTGLIL EIFAARARSH EGKLQVELAR LQYLSTRLVR RWSHLERQRG GVGLRGGPGE TQIELDRRMI DVRIKSVKER LEKVKRQRGT QRKSRERHGT FRVSLVGYTN AGKSTLFNVL VKAQAYAADQ LFATLDTTTR QMYLEDARRS VSLSDTVGFI RDLPHSLVEA FQATLQESAD SDLLLHVVDA ASPTWLEQLH EVQRVLREIG AESVPQFLVF NKIDLLEDDA LPRVMCDQYE IEPGRVVSRF FISAAANEGL GALRRAIAQA SLDADARRGQ PLADVRFDPV PPDAEPMAPE ASNDVPAHPH EA
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