Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2833 |
Symbol | |
ID | 6161587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3118851 |
End bp | 3121247 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641665611 |
Product | phosphoenolpyruvate synthase |
Protein accession | YP_001791863 |
Protein GI | 171059514 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGCAA TCAACCTGGC GACCGCCCTG GTCGTACCGT TCGAACACCT GAGAATGACC GACGTCGAGG TCGTGGGCGG CAAGAACGCC TCGCTCGGCG AAATGATCAG CCAGCTTGCC GCTTCGGGCG TGCGGGTGCC GGGCGGCTTC GCCACCACGG CGCTGGCTTT CCGCGAGTTC CTGACCGCCG GCGGCCTGAC CGACAAGATC AACGCGCGGC TGTCGGCGCT CGACACCGAC GACGTGCGCG CGCTGGCCGA GGCCGGTGCC GAGATCCGCG GCTGGGTCGA GTCGGCGCCG TTCCCGGCCG ACTTCGAGGC GGCGATCCGT GCCGAGTTCG TCAAGCTGAC GGCCGAGCAC CCGGGCGCCT CGTTCGCGGT GCGCTCGTCG GCCACGGCCG AAGACATGCC CGACGCCTCG TTCGCCGGTC AGCAGGAGAC CTTCCTGAAC GTGGTCGGCA TCGACGACGT GCTGCACAAG ATGCGCGAGG TGTTCGCCTC GCTCTACAAC GACCGCGCCA TCAGCTACCG CGTGCACAAG GGCTACGCCC ACCACGACGT GGCGCTGTCG GCCGGCGTGC AGCGCATGGT CCGTTCCGAC CTGGGCGCAG CCGGCGTGAT GTTCACGATC GACACCGAGT CGGGTTTCGA GGACGTGGTC TTCATCACCT CCAGCTACGG CCTGGGCGAG ACGGTGGTGC AGGGCGCCGT CAACCCCGAC GAGTTCTACG TGCACAAGCC GGCACTCAAG AACGGCAAGC TGGCGGTGAT CCGCCGCAGC CTGGGCTCCA AGCTGATCCG CATGGAGTTC GCCACGCCCG AGGAGAAGGC CGCGAGCGGC AAGCTGGTGC GCACCACCGA CACGCCGCCC GAGATGCGCA ACCGCTATTC GCTCAGCGAT GCCGACGTGA CCGAGCTGGC GCGCTTCGCG GTGATCATCG AGCAGCACTA CGGCCGCGCG ATGGACATCG AGTGGGGCAA GGACGGCGGC GACGGCCTGC TCTACATCCT GCAGGCGCGC CCCGAGACGG TGAAGAGCCA GGCGGGCAAC CAGGTCGAGC ACCGCTACAA GCTCAAGGGC CACAGCACGG TGCTGGCCGA AGGCCGCGCG ATCGGTCAGA AGATCGGTAC CGGCCCGGTG CGGCTGGTGC ATTCGATCGC CGAGATGAGC CGCGTGCAGC CGGGCGACGT GCTGGTCACC GACATGACCG ACCCGAACTG GGAGCCGGTG ATGAAGCGCG CCAGCGCGAT CGTCACCAAC CGCGGCGGGC GCACCTGCCA CGCGGCGATC ATCGCGCGCG AACTGGGCAT CCCGGCGGTG GTCGGCTGCG GTGACGCCAC CGAGATCCTC AAGGACGGCC AGCTGGTGAC GGTGGCCTGC TCCGAAGGCG ACACCGGCTT CATCTACGAC GGCCTGCTCG AGATGGAGGT CAGCGAGGTG CAGCGCGGCG AGCTGCCGTA CTCGCCGGTC AAGATCATGA TGAACGTGGG CAACCCGCAG CTGGCGTTCG ACTTCTGCCA GATGCCGAAC TCGGGCGTCG GCCTGGCGCG CCTGGAGTTC ATCATCAACA ACAACATCGG CGTGCACCCG AAGGCGATCC TCGACTACCC GAACGTCGAT GCCGACCTGA AGAAGGCGGT CGAGTCGGTG GCGCGTGGCC ATGCCAGCCC GCGCGCGTTC TACGTCGACA AGCTGGTCGA GGGTGTTGCC ACGATCGCGG CGGCGTTCTG GCCCAAGCCG GTGATCGTGC GGCTGTCTGA CTTCAAGAGC AACGAGTACC GCAAGCTCAT CGGTGGCTCA CGTTATGAGC CTGAAGAAGA GAATCCGATG CTCGGCTTCC GCGGCGCTGC ACGTTACCTG AGCGCCGATT TCGGCGAGGC CTTCGCCATG GAATGCGAGG CGCTCAAGCG CGTGCGTCGC GACATGGGGC TGACCAACGT CGAGATCATG GTGCCCTTCG TGCGCACGCT CAAGCAGGCC GAGCGGGTGG TCAACATGAT GGCCGACCAG GGTCTCAAGC GCGGCGTCGA CGGCCTGCGC GTGATCATGA TGTGCGAGAT CCCGAGCAAC GCGATCCTGG CCGACCAGTA CCTCGAGTTC TTCGACGGCA TGTCGATCGG TTCGAACGAC CTGACCCAGC TCACGCTGGG CCTGGACCGC GACTCGGGCA TGGAGTTGCT GGCGGCCGAT TTCGACGAGC GCGATCCGGC CGTCAAGGCG CTGATCTCGC GTGCCATCGC GGCTTGCCGT GCGCACGGCA AGTACATCGG CATCTGCGGC CAGGGCCCCA GCGACCACCC CGACTTCGCC GACTGGCTGG CGCAGGAGGG CATCGTGTCG ATGTCGCTGA ACCCGGATTC GGTGATCGCC ACCTGGCAGC GCCTGGCCAA GCGCTGA
|
Protein sequence | MSAINLATAL VVPFEHLRMT DVEVVGGKNA SLGEMISQLA ASGVRVPGGF ATTALAFREF LTAGGLTDKI NARLSALDTD DVRALAEAGA EIRGWVESAP FPADFEAAIR AEFVKLTAEH PGASFAVRSS ATAEDMPDAS FAGQQETFLN VVGIDDVLHK MREVFASLYN DRAISYRVHK GYAHHDVALS AGVQRMVRSD LGAAGVMFTI DTESGFEDVV FITSSYGLGE TVVQGAVNPD EFYVHKPALK NGKLAVIRRS LGSKLIRMEF ATPEEKAASG KLVRTTDTPP EMRNRYSLSD ADVTELARFA VIIEQHYGRA MDIEWGKDGG DGLLYILQAR PETVKSQAGN QVEHRYKLKG HSTVLAEGRA IGQKIGTGPV RLVHSIAEMS RVQPGDVLVT DMTDPNWEPV MKRASAIVTN RGGRTCHAAI IARELGIPAV VGCGDATEIL KDGQLVTVAC SEGDTGFIYD GLLEMEVSEV QRGELPYSPV KIMMNVGNPQ LAFDFCQMPN SGVGLARLEF IINNNIGVHP KAILDYPNVD ADLKKAVESV ARGHASPRAF YVDKLVEGVA TIAAAFWPKP VIVRLSDFKS NEYRKLIGGS RYEPEEENPM LGFRGAARYL SADFGEAFAM ECEALKRVRR DMGLTNVEIM VPFVRTLKQA ERVVNMMADQ GLKRGVDGLR VIMMCEIPSN AILADQYLEF FDGMSIGSND LTQLTLGLDR DSGMELLAAD FDERDPAVKA LISRAIAACR AHGKYIGICG QGPSDHPDFA DWLAQEGIVS MSLNPDSVIA TWQRLAKR
|
| |