Gene Lcho_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2787 
Symbol 
ID6162251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3069714 
End bp3070685 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content66% 
IMG OID641665564 
Productsulfate adenylyltransferase subunit 2 
Protein accessionYP_001791817 
Protein GI171059468 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR02039] sulfate adenylyltransferase, small subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000250358 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCCC CCACCACCAT GACCCAACTG CTTCCTGAAG TGGATCACCG CCACCTCGAC 
GCGCTGGAAG AAGAAGCGAT CTTCATCCTG CGCGAAGTCG CCGGCGCCTT CGAGCGCCCC 
GGCCTGCTGT TCTCCAGCGG CAAGGATTCC TGCGTCGTCC TGCACCTGGC CGAGAAGGCC 
TTCAAGCGCA AGCTGAGCGC CGCGGGCGAG CGCCCGCGCT TCGCCGGCAA GCTGCCGTTT 
CCGCTGGTGC ACGTCGACAC CGGTCACAAC TTCCCGGAAG TGATCAGCTT CCGCGACGAG 
CGCATCGCCG AGATGGGCGA GCGCCTGATC GTCGGCCACC TCGAAGACTC GATGAAGCGC 
GGCACCATCC GCCTGGCCCA TCCGCTGGAA TCGCGCAACG GCCACCAGAC GGTGACGCTG 
CTCGAGACCA TCGAGGAGCA CCGCTTCGAC TGCATGATCG GCGGCGCACG GCGTGACGAG 
GAAAAGGCGC GCGCCAAGGA GCGCATCTTT TCGCACCGCG ACAGCTTCGG CCAGTGGCAG 
CCCAAGGAGC AGCGCCCCGA GCTGTGGAAC CTGTTCAACA CCCGCATCAA GCCGGGCGAG 
CACTTCCGGG CATTTCCGAT CAGCAACTGG ACCGAACTCG ACGTCTGGCT CTACATCGAG 
CGCGAGAAGA TCCCGCTGCC GCACATCTAC TACACCCACA AGCGCGAGAT CTACCGCCGC 
AAGGGCCTGC TGGTGCCGGT GACCGACGTG ACGCCGCCGG ACGCGAGCGA CGTGATCGAG 
ACGGTCGACG TGCGCTTTCG CACCGTCGGC GACATGACCT GCACCTGCCC GGTCGAGAGC 
GATGCCTCGA CCACCGCCGA CATCGTCGCC GAGACGCTGC AGGTCACCGT CTCCGAGCGT 
GGCGCCACCC GCATGGACGA CCGCACCTCC GAGGCCTCGA TGGAGCGCCG CAAGAAGGAA 
GGCTATTTCT GA
 
Protein sequence
MNAPTTMTQL LPEVDHRHLD ALEEEAIFIL REVAGAFERP GLLFSSGKDS CVVLHLAEKA 
FKRKLSAAGE RPRFAGKLPF PLVHVDTGHN FPEVISFRDE RIAEMGERLI VGHLEDSMKR 
GTIRLAHPLE SRNGHQTVTL LETIEEHRFD CMIGGARRDE EKARAKERIF SHRDSFGQWQ 
PKEQRPELWN LFNTRIKPGE HFRAFPISNW TELDVWLYIE REKIPLPHIY YTHKREIYRR 
KGLLVPVTDV TPPDASDVIE TVDVRFRTVG DMTCTCPVES DASTTADIVA ETLQVTVSER 
GATRMDDRTS EASMERRKKE GYF