| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2784 |
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| Symbol | |
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| ID | 6162248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3066674 |
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| End bp | 3068380 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665561 |
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| Product | sulfite reductase (ferredoxin) |
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| Protein accession | YP_001791814 |
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| Protein GI | 171059465 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000163848 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACCAGT ACACCCCTTT CGACCGCCAG TTCGTGCATG CCCGCGCGGC GCAGTTCCGT
GACCAGCTCG AGCGCAACCT GGCCGGCACG CTGGGCGATG ACGAGTTCCG TGCCCTGCGC
CTGCAGAACG GCTGGTACAT CCAGCGCCAT GCGCCGATGC TGCGCGTGGC CGTGCCCTAC
GGCGAGCTCA ACAGCGCCCA GCTGCGCGCG ATGGCCGACA TCGCCCGCAA GCACGACCGC
GGCTACACCC ACTTCACCAC CCGCCAGAAC GTCCAGTACA ACTGGATCCC GCTGCCGCAG
GCTGCCGACG TGATGGACAA GCTGGCCGCC GTCGACATGC ACGGCATCCA GACCAGCGGC
AACTGCATCC GCAACATCAC CAGCGACGCG CTGGCCGGCG TGGCCGCCGA CGAGGCGATC
GACCCGCGTC CCTACTGCGA AATCATGCGC CAGTGGAGCA CGCTGCACCC CGAGTTCGCC
CACCTGCCGC GCAAGTTCAA GATCGCCGTC AGCGGCGCCA CCGAGGACCG CGCCGCCACC
GGCTGGCACG ACATCGGCCT GGTGCTGCGC AAGAACGAAG CCGGCGAGAT CGGTTTCCAG
GTGCGCGTGG GCGGCGGCAT GGGCCGCACG CCGATCATCG GCTCGGTGAT CAGCGAGTTC
GTGCCCTGGC AGCAGATCCT CGTGTTCATC GAGGCCGTGG TGCGGGTCTA CAACCGCTAC
GGCCGGCGCG ACAACGCCTA CAAGGCGCGC ATCAAGATCC TCGTCAAGGC CGAAGGCCAG
AAGTTCTTCG ACGCCGTTGC GGTCGAATTC AAGAACATCC TGGAGCGCGA CCTCGACGGC
AGCGCCCACC TCATCACGCA GGCCGAATTC GACCGCGTCA ACGCCTGCTT CGTGCGCCCG
GCCGGCGTGG TGGCGCAGCC CGAAGTGGCC GCTGCCGCCG ACCTGCCGCT GGCCTACCGC
CGCTGGCTCG AACGCAACGT GCACGCACAC CAGGTGGCCG GCTACCGCGC CGTGACGCTG
TCGGTCAAGC GCGCCGGCCA GGCGCCCGGC GACGTCACCG ACGCTCAGAT GGACCAGGCC
GCCGATCTGG CCGACGTCTA CAGCTGCGGC GAGCTGCGTG TCACGCACGA CCAGAACCTG
CTGCTGCCGT GGGTCAAGGC CGCCGACCTG CCGGCGCTGT ACGAAGCCGC CAAGGCCGCC
GGCTACGCCA CGCCCAACAT CGGCCTGCTG ACCGACATGA TCGCCTGCCC GGGCGGCGAC
TTCTGCGCGC TGGCCAATGC GCGCTCGATT CCCGTCGCGG CCGAGATCAC CGAGCGTTTC
GACGACCTCG ACGAAGTCTT CGACCTCGGC GACATCGACC TGCACATCAG CGGCTGCATC
AACTCCTGCG GCCACCACCA CAGCGGCCAC ATCGGCGTGC TCGGCGTCGA CAAGGACGGC
ACCGAGTGGT ATCAGCTGAC GCTGGCCGGC TCGGACGGCT CGAACCACGC GCCCACCGCC
GTCACCGGCA AGGTGATCGG CCCGTCGTTC GCAGCCAGCG AGGTCGTGGA TGCGATCGAG
GCCATCCTCG ACGTCTACCG CGCCGAGCGC ACGGCCGGCG AGAAGTTCAT CGACGCCGTC
AAGCGCCTGG GTCTGGAGCC GTTCAAGGCC GCCGCCAACG CCCGGCGCAC CGCCACCGCA
CGCCATTCGG ACACCGCCGA AGCCTGA
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| Protein sequence | MYQYTPFDRQ FVHARAAQFR DQLERNLAGT LGDDEFRALR LQNGWYIQRH APMLRVAVPY
GELNSAQLRA MADIARKHDR GYTHFTTRQN VQYNWIPLPQ AADVMDKLAA VDMHGIQTSG
NCIRNITSDA LAGVAADEAI DPRPYCEIMR QWSTLHPEFA HLPRKFKIAV SGATEDRAAT
GWHDIGLVLR KNEAGEIGFQ VRVGGGMGRT PIIGSVISEF VPWQQILVFI EAVVRVYNRY
GRRDNAYKAR IKILVKAEGQ KFFDAVAVEF KNILERDLDG SAHLITQAEF DRVNACFVRP
AGVVAQPEVA AAADLPLAYR RWLERNVHAH QVAGYRAVTL SVKRAGQAPG DVTDAQMDQA
ADLADVYSCG ELRVTHDQNL LLPWVKAADL PALYEAAKAA GYATPNIGLL TDMIACPGGD
FCALANARSI PVAAEITERF DDLDEVFDLG DIDLHISGCI NSCGHHHSGH IGVLGVDKDG
TEWYQLTLAG SDGSNHAPTA VTGKVIGPSF AASEVVDAIE AILDVYRAER TAGEKFIDAV
KRLGLEPFKA AANARRTATA RHSDTAEA
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