| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2767 |
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| Symbol | |
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| ID | 6163625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3049400 |
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| End bp | 3051946 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665544 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001791797 |
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| Protein GI | 171059448 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.053662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCCC TGCCTCCCTC GCCCCCCCTG CCCGATTCCG GCCATCCCGC CTTTGCCGAC
ATCGGCTTCG ACGAGCCCGA CCGGCGGGAT GAAACACACG ACCCGCACGA GCCGCCGGCG
CGGCCTGCGC TGCCCGCGGG CCTGCTCGCC AACCTCAACC CGGAGCAGTA CGCCGCCGTC
ACGCTGGCGG CCGAGCCGGC GCTGATCCTG GCCGGCGCCG GCTCGGGCAA GACCCGCGTG
CTGACCACCC GCATCGCCTG GCTGCTGCAG ACCGGCCAGA TCGGCCCCGG CGGCCTGATG
GCGGTCACCT TCACCAACAA GGCCGCCAAG GAGATGGTGC ACCGCCTCTC GACGATGCTG
CCTTACAACG TGCGCGGCAT GTGGATCGGC ACCTTCCACG GCCTGTGCAA CCGCTTCCTG
CGCGCGCACT GGAAAATGGC CGGCCTGCCG CAGAGCTTCC AGATCCTCGA CTCGGGCGAC
ACGCTGAGCG CGGTCAAGCG CGTCATCAAG GCCATGAAGC TCGACGAGGA ACGCTTCGTG
CCCAAGCAGG TGAGCTGGTT CATCGCGTCC AGCAAGGACG ACGGCAAGCG CCCGAAAGAC
CTGCCCACCG ACGACGGCCA GGCGCGCACG ATGGTCGAGA TCTACCAGGC CTACGAGGAC
CAGTGCCAGC GCGAGGGCGT GGTCGATTTC GCCGAGCTGA TGCTGCGCAG CTACGAGCTG
ATGCGCGACC ACCCGGAGAT CCGCGAGCAC TACCAGCGGC GCTTCCGCCA CATCCTGGTC
GACGAATTTC AAGACACCAA CCGGCTGCAG TACCTGTGGC TGAAGATGTT CGCCGGCACG
CCCGGCGCGC TCGCCGGGCG CGAGCCGGCG GCGGTGTTCG CGGTCGGTGA CGACGACCAG
AGCATCTACG CCTTCCGTGG CGCGCAGGTC GGCAACATGA GCGACTTCGA GCGCGAGTAC
CGCGTCAGGC AGGTCATCAA GCTGGAGCGC AACTACCGCT CGTTCGGCAA CATCCTCGAC
TCGGCCAACG CGCTGATCGC CCACAACAGC CGCCGCCTGG GCAAGAACCT GCGCACCGAG
GCCGGGCCCG GCGAGCCGGT GCGGATCTTC GAGTCGACCA GCGATTTCGC CGAGGCACAG
TGGCTGCTCG AAGAACTGCA GCAACTGCAC CGCGGCGGCA TGGCGCGCAG CGAAACCGCG
ATCCTCTACC GCAGCAACGC GCAGTCGCGC GTGATCGAGT CGGCGCTGTT CAACGCCGGC
ATGCCCTACC GCGTCTACGG CGGCCTGCGC TTCTTCGAGC GCGCGGAGAT CAAGCACGCG
CTGGCCTACC TGCGCCTGAC CGAGAACCCG AACGACGACA CCAGCTTCCT GCGTGTCGTC
AACTTCCCGG CCCGCGGCAT CGGCGCACGC AGCGTCGAGC TGCTGCAGGA CGCGGCCCGC
GCCAGCGGCC GCAGCCTCTA TCAAAGCGTG GGCGCACTCG GCGGCGCGGC CGGCACCAAG
CTGGCGGGCT TCACCGCGCT GGTCGACCGG CTGCGTGACG CCACCCGCGG CCTGACGCTG
CGCGAGATCA TCGAACGCAT GCTCGACGCC AGCGGCCTGA TCAACTTCTA CCGCACCGAG
AAGGAAGGCC AGGACCGCAT CGAGAACCTG GAGGAACTCG TCAACGCGGC CGAGGCCTTC
GTGACGATCG AGGGTTTCGG CAAGGACGCG GTGGCGCTGC CGGTCGACGA GACCGCGCCC
GGCACCATCG CCGCGCCCCT GCCCGGCGAG CCCGAGGCGG TGGCCGCGGT CGACCTGCTG
CCCGACGCCG AAACCGGCGA GATCCTGTCG CCGCTGGCGG CCTTTTTGAC CCACGCCGCG
CTCGAAGCAG GCGACAACCA GGCCCAGGCC GGCCAGGACG CCGTGCAGCT GATGACGGTG
CACTCGGCCA AGGGCCTGGA GTTCGACGCG GTCTTCATCA CCGGGCTCGA AGAAGGCCTG
TTCCCGCACG AGAACTCGCT CAACAGCATC AGCGCCGGCG GCAACGAAGG CCTCGAAGAA
GAGCGCCGGC TGATGTACGT GGCGATCACG CGGGCGCGGC AGCGGCTGTA CATCAGCTTC
AGCCAGACCC GCATGCTGCA CGGCCAGACG CGCTACAACG TCAAGAGCCG CTTCTTCGAC
GAGCTGCCCG AGGCGGCGCT GAAGTGGATC ACGCCCAAGC AGCAGGGTTT CGGCTCGGGT
TACGCGCAGC AATACCAGCA GGCCTGGCAG CGCGGCTCGG GCCCCGGCGG CATGGTCGGC
GCCGGGCGCA ACAGCGGCTG GCAACCGGCC CCGGCGGCGC CGCCGTCATG GGCCGCGCCG
GTGCCCGCGG CGATGCGCCA GAGCGCGGCC AAGGACAACG GCCACGGCCT GCGCCAGGGC
CAGGGCGTGT TCCACACCAA GTTCGGCGAG GGCGTGGTGC TGACGCTCGA AGGTGTCGGC
GCGGACGCCC GCGCCCAGGT CAACTTCGGC CGCCACGGCA CCAAGTGGCT GGCACTCGCG
ATCGCCAAGC TGACGCCGAT CGAGTGA
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| Protein sequence | MSALPPSPPL PDSGHPAFAD IGFDEPDRRD ETHDPHEPPA RPALPAGLLA NLNPEQYAAV
TLAAEPALIL AGAGSGKTRV LTTRIAWLLQ TGQIGPGGLM AVTFTNKAAK EMVHRLSTML
PYNVRGMWIG TFHGLCNRFL RAHWKMAGLP QSFQILDSGD TLSAVKRVIK AMKLDEERFV
PKQVSWFIAS SKDDGKRPKD LPTDDGQART MVEIYQAYED QCQREGVVDF AELMLRSYEL
MRDHPEIREH YQRRFRHILV DEFQDTNRLQ YLWLKMFAGT PGALAGREPA AVFAVGDDDQ
SIYAFRGAQV GNMSDFEREY RVRQVIKLER NYRSFGNILD SANALIAHNS RRLGKNLRTE
AGPGEPVRIF ESTSDFAEAQ WLLEELQQLH RGGMARSETA ILYRSNAQSR VIESALFNAG
MPYRVYGGLR FFERAEIKHA LAYLRLTENP NDDTSFLRVV NFPARGIGAR SVELLQDAAR
ASGRSLYQSV GALGGAAGTK LAGFTALVDR LRDATRGLTL REIIERMLDA SGLINFYRTE
KEGQDRIENL EELVNAAEAF VTIEGFGKDA VALPVDETAP GTIAAPLPGE PEAVAAVDLL
PDAETGEILS PLAAFLTHAA LEAGDNQAQA GQDAVQLMTV HSAKGLEFDA VFITGLEEGL
FPHENSLNSI SAGGNEGLEE ERRLMYVAIT RARQRLYISF SQTRMLHGQT RYNVKSRFFD
ELPEAALKWI TPKQQGFGSG YAQQYQQAWQ RGSGPGGMVG AGRNSGWQPA PAAPPSWAAP
VPAAMRQSAA KDNGHGLRQG QGVFHTKFGE GVVLTLEGVG ADARAQVNFG RHGTKWLALA
IAKLTPIE
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