Gene Lcho_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2702 
Symbol 
ID6162322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2973669 
End bp2973944 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content64% 
IMG OID641665479 
Producthypothetical protein 
Protein accessionYP_001791732 
Protein GI171059383 
COG category[S] Function unknown 
COG ID[COG2938] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00765809 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACACTG CCCTGCTCGA TGCCCGCTCA CTGAGCAAAC TGCGTTGGCG TTGCCGCCGT 
GGTCTGCTGG AGAACGACCT TTTCATCGAG CGCTTTTTCC AGCGCTACGA GGACGTCCTG
ACCGTGTGGC AAGCCGCCGG TCTGGATGCC CTGATGGATT TGGCCGATAA CGATCTGCTG
GACCTGCTGC TGCAGCGAAG CGAACCCCAG GGCGAGCTCG CGAGCCCCGA GGTGCTGCAG
GTACTGGCCC AGTTGCGCGA GCGCCCGCCG CGGTGA
 
Protein sequence
MDTALLDARS LSKLRWRCRR GLLENDLFIE RFFQRYEDVL TVWQAAGLDA LMDLADNDLL 
DLLLQRSEPQ GELASPEVLQ VLAQLRERPP R