Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2661 |
Symbol | |
ID | 6162007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2921041 |
End bp | 2922582 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641665437 |
Product | cobyric acid synthase CobQ |
Protein accession | YP_001791691 |
Protein GI | 171059342 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1492] Cobyric acid synthase |
TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC TGGTCCGATC GCCGGCCCGT GCCGTCATGG TGCTGGGCAC CAGCAGCGGC GCCGGCAAGA GCTGGCTGGC CACCGCGCTG TGCCGCTGGT ATGCGCGCCA GGGCCTGAAA GTGGCGCCGT TCAAGGCCCA GAACATGAGC AACAACGCCC GTGTCGTGCC CGGCCTGATC GGCGCGGACG GCGCGCAGCC CATGGGCGAG ATCGGCAGCG CGCAGTATTT CCAGGCCCTG GCCGCGCGCT GCGTGCCCGG CGTGATGCAC AACCCGGTGC TGCTCAAGCC CGAGGCCGAC ACGCGCAGCC AGGTGGTGGT GCTGGGCGAG GTGCGCCGTG ACTTGGCCGA GGTGCCGTGG CGCGAGCGCA GCGAGGCGCT CTGGCCACAC GCCCGCGCCG CCTTGCAGCA GCTGATGGCC CACAACGACG TGGTCGTGAT CGAAGGCGCC GGCTCGCCCG CCGAGATCAA CCTGCACGCC AGCGACTACG TCAACATGCG CACCGCACTG GCGGCGCAAG CCGCTTGCCT GGTGATCACC GACATCGACC GCGGCGGCGC CTTCGCCCAC CTCTACGGCA CGCATCAGCT GCTGCCGGCC GACGAGCGCG CGCTGATCCG CGGCTTCGTG CTGAACCGTT TTCGCGGCGA CGCGGCCTTG CTGGCGCCCG GGCCCGAACA ACTGCAGGCG CTGACCGGCG TGCCGACGAT CGGCGTGCTG CCGATGTGGC GCGAGCACGG CCTGCCCGAG GAAGACGGCC TGTACGAGCC GGGCGGACAC ACGGCCGCGC CGGGCCACGC CGCCCAGCGG CTGCGCATCG CCATCGTCGC CTACCCGCGC ATCAGCAACC TCGACGAGTT CCAGCCTCTG CGCAACCTGC CGGGCGTGCA ACTGGTCTGG GCGCGCCAGC CGGCTGATCT GGAGCGCGCC GACTGGGTCA TCCTGCCGGG CTCGAAACAC AGCCAGGCCG ACCTCGCCTG GCTGCGCGCA CAGCGGCTCG ACGCGGCGAT CGCCCGCCAT GCCGCAGCCG GCGGCGCGCT GCTGGGCATC TGCGGCGGCC TGCAAATGCT GGGCGAAGCG CTGATCGACC TGCACGGCGT CGAGGGCGGC TTCGACGCGC TTGGTGGTAA TGGCCCCGGC CTGGGCCTGC TGCCGCTGGT GACGCAGTTC GATCCGCACA AATTGTTGCG GCCGACACGC GCCTCGTTCG GCGCCACCCA CGGCGTCTGG GCGGCGTTGG CCGGCGTCGC CTTCGACGGC TACGAGATCC ACAACGGCCG CTCAATCCAG CACCCGGCGA TGGCGTCGGC GCTGCCCGCG CTGCGCAGCA CGTGCGGCGA CACCATCGGT TGGCAGAACG GCTCGGTGCT GGGCGTCTAC ACGCACGGCC TGTTCGAATC GCCGGCCGTG CTGCAGGCGC TGTTCGGCGC CGGCTGCCGC ACGCTCGACA GCGTCTTCGA CGGCCTGGCC GATTTCGCCG AGCGGCATTT CAGCCTCGGT GCGCTGGCCG GGCTGCTGAG CCCGAAGCAG CCACCCGGCT GA
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Protein sequence | MSDLVRSPAR AVMVLGTSSG AGKSWLATAL CRWYARQGLK VAPFKAQNMS NNARVVPGLI GADGAQPMGE IGSAQYFQAL AARCVPGVMH NPVLLKPEAD TRSQVVVLGE VRRDLAEVPW RERSEALWPH ARAALQQLMA HNDVVVIEGA GSPAEINLHA SDYVNMRTAL AAQAACLVIT DIDRGGAFAH LYGTHQLLPA DERALIRGFV LNRFRGDAAL LAPGPEQLQA LTGVPTIGVL PMWREHGLPE EDGLYEPGGH TAAPGHAAQR LRIAIVAYPR ISNLDEFQPL RNLPGVQLVW ARQPADLERA DWVILPGSKH SQADLAWLRA QRLDAAIARH AAAGGALLGI CGGLQMLGEA LIDLHGVEGG FDALGGNGPG LGLLPLVTQF DPHKLLRPTR ASFGATHGVW AALAGVAFDG YEIHNGRSIQ HPAMASALPA LRSTCGDTIG WQNGSVLGVY THGLFESPAV LQALFGAGCR TLDSVFDGLA DFAERHFSLG ALAGLLSPKQ PPG
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