| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2657 |
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| Symbol | |
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| ID | 6162801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2918068 |
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| End bp | 2918463 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665433 |
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| Product | aspartate 1-decarboxylase |
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| Protein accession | YP_001791687 |
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| Protein GI | 171059338 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0853] Aspartate 1-decarboxylase |
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| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCCGCA CCCTGCTCAA ATCCAAGATC CACCGCGCCG TCGTCACCCA CTGCGAGCTG
CATTACGAGG GCTCCTGCGG CATCGACGAA GACCTGCTGG ACGCCGCCAA CCTGTGCGAG
AACGAGCAGA TCCACGTCTG GAACATCAAC AACGGCGAGC GTTTCGTCAC CTACGTGATC
AAGGCGCCGC GGGGCAGCGG CATCATCTCG CTCAACGGCT CGGCGGCGCG GCGCGCCAGC
GCGGGCGATC TGGTCATCAT CGCGGCCTTC GCGCAGGTGC ACGAGGAGCA GGTGCCCACG
CATCAGCCCA AGCTGGTGTT CATGGACGAG GCCAACCGCA TCAAGGAACT GCGCAGCGAG
CCGCAGAACC CGCCGCAGAC CTCGCCGCTG CGGTGA
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| Protein sequence | MFRTLLKSKI HRAVVTHCEL HYEGSCGIDE DLLDAANLCE NEQIHVWNIN NGERFVTYVI
KAPRGSGIIS LNGSAARRAS AGDLVIIAAF AQVHEEQVPT HQPKLVFMDE ANRIKELRSE
PQNPPQTSPL R
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