| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2628 |
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| Symbol | |
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| ID | 6164011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2884293 |
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| End bp | 2885948 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665404 |
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| Product | cytochrome c, putative |
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| Protein accession | YP_001791658 |
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| Protein GI | 171059309 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCGA TGCCGCCACG GCACACCGCG CTGCGCCGCG CCCTCGCCCC GTGCGTGCTG
GGCCTGCTGA TGCTGACCAT CGGCGGCGGC GCCTGGGCCC AGCCCACCGA TGAAGACGCT
GCGCTGCGCA GCGGGCGAGC GATCTTTCAC GACGGCATCA ACCGCCAGGG TGGCGACGTG
CTCGCGTCGG CGGGCAGCAA TGTCGACCTG CAGGGCACCA AGGTGGCCTG TGCCCGCTGC
CACGGCAGCG ACGGCACCGG CAACCGCGAA GGCGGCCTGA CGGCACCCGC GCTGCTGTGG
ACGGCACTCG GACAAGCTCG CCCCGCCAGT CCCGGACTGC TGCCGCGCTC GGCCTACACC
GAAACGACGC TGTTGCGCGC CCTGCGCCAG GGGATCGATG CCGACGGACG CCCCTTGTCG
TCGGCCATGC CGCGATTCAC GCTGGCACCG CGCGACGAGG CGGACCTGCT GACCTATCTG
CGCGTGCTGG GCAGCGCCGC CGATCGCGAT CCCGGCATCG CAGATGACGA GATCGTGCTC
GGCGGCGTGC TGCCGCTGAG CGGCCCGCAG GCCGACGCGG GCCGGGCAGC AGAGGCGGCG
ATCCGCGCCT GCATCGAACA AGGCAACCGC AGCGGCGGCG TGTTCGGCCG GCGCATCACC
TGGCAGGCCC TGGACGCGGC CCGGCTGGCG CCGACCGAGA TCGCCAAGCA CCTGCAAGCA
CGGACGCTCG CCGTCATCGC GCCCTGGTGG AATGAACTCG GCAGCAACGA ACTCGCTCTG
CGACTGCCCG GCGTACCGGT GATCGGCCCG CTCGGCGCAG CAGCAGAACT CGAGGGCCAG
AACGCCATGC TGTTTGCGGT GGTGCCGCAG TTGAGCGACC AGGTGCGGGT GCTGATCGAC
GCGTTTGCAG GCGGGGACCT CGATGCCGTG AAGCCGCCGA CCGCGACGAC ACCCAGGATG
CGGCGGCTGG CTGTGATCAC ACCCCCCGGC CCGCACCACC GCAGCGCGCA GCGGGCCAGC
CAGCGCCAAG CCCTGAATCA CCCGGAACTG GAGCTCGTGG TCTGGCAACC CATGCTCGGA
CGCTCGGAGG CGACCCTCAA GCGCGACGCC GTCTCCTGGC TGGCCCGGCA ATCGGTCGAT
GCGGCCCTGG TCCTGGGTTC GCCCGACTGG ATGCACGCGG TTGCCGCGGC GACCGACGCA
CCGGTCTCCG CGCCGCAAGA CCTTTGGCAG GCGCCGCTCC TCCTGGGCAC GTTCAGCGAA
CTGGGGCGGC GTGTACTCGA TTGGCCACAG TCGATGCGCA GTCGCTTGCG CATGAGTCAT
GCGCAGCCGA CTTCGCCCCC CCCGGATGCG GGGTCCCTGG GACGCTCGCT GGGCGACATC
GGCGAGCAGG TGACGCACCC TTCCCTGCAG GGCGTTGCTT ACGCAGCCTC CTGTCTGGCC
GTGGAAGGGC TGCGGCGCAC CGGGCGTGAC GTGAGCCGGC AACGGCTGCG CACGGCCATC
GAAGAGATCC GCGATTTCCG CACCGGAGTC CTGGGCCCGT TGAGCTACTC ACGCTCGAAC
CACGTCGGCT CCCAGGGCAG CGCCATCGTG CGCGTCACGG CAGACGGCCG ATCACTCGAA
CCGGTTCGCG CCTGGCGCAC ACCAGAGGCC TGGTGA
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| Protein sequence | MAPMPPRHTA LRRALAPCVL GLLMLTIGGG AWAQPTDEDA ALRSGRAIFH DGINRQGGDV
LASAGSNVDL QGTKVACARC HGSDGTGNRE GGLTAPALLW TALGQARPAS PGLLPRSAYT
ETTLLRALRQ GIDADGRPLS SAMPRFTLAP RDEADLLTYL RVLGSAADRD PGIADDEIVL
GGVLPLSGPQ ADAGRAAEAA IRACIEQGNR SGGVFGRRIT WQALDAARLA PTEIAKHLQA
RTLAVIAPWW NELGSNELAL RLPGVPVIGP LGAAAELEGQ NAMLFAVVPQ LSDQVRVLID
AFAGGDLDAV KPPTATTPRM RRLAVITPPG PHHRSAQRAS QRQALNHPEL ELVVWQPMLG
RSEATLKRDA VSWLARQSVD AALVLGSPDW MHAVAAATDA PVSAPQDLWQ APLLLGTFSE
LGRRVLDWPQ SMRSRLRMSH AQPTSPPPDA GSLGRSLGDI GEQVTHPSLQ GVAYAASCLA
VEGLRRTGRD VSRQRLRTAI EEIRDFRTGV LGPLSYSRSN HVGSQGSAIV RVTADGRSLE
PVRAWRTPEA W
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