Gene Lcho_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2616 
Symbol 
ID6162776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2867998 
End bp2868603 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content71% 
IMG OID641665392 
Productfimbrial assembly 
Protein accessionYP_001791646 
Protein GI171059297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.863286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA TCCACAGCCT CGACTTCATG CAGGCCAGGC CCACGCCCTG GCTGGGCTGG 
GCTGCGGCCG GCATCGGCCT GATCGTGCTG GCCGCCGTCG CCCTGCCGCT GCTGCCGCTG 
GTGCAGGACA ACCAGATGCG CGCCGACGCC TTGCGCACCA TCAGCCGCCA GACCCAGGAA 
GACAGCGCAC AGGTGATCGT GCAGAGCCCG GCCGAGCGGC GCCGCCAGGC CCAGTCGCGC 
CGCTTGCTGC AGCAGCTCGA CGCGCCCTGG AACGAACTCT TCGCCCTGCT CGAACAGCAT 
GCCGATCCTC AGGTCGGGCT GCTGCGCATC GAGCCTGACG CCGGCAGCGG CCAGATCCGC 
CTGATGGCGA TGTGCAAGGA CCTCGGCGTG ATGGCCACCT GGCTGCGCCG CCTCGAACAG 
GATCCGCGCC TGAGCGACGT GCAGATCGTG CAGCACCAGA TCGAGGAGCT GGCGCCGGGT 
CGGCCGGTTC GATTCAACCT GGTGGCGCGC TGGCGCGGTG CACCCGCAGG CGGCAAGGTC 
GCCGCGGCGC GCCAGACCGC CGACCCGGTC GGCGCCGGAC TCAGCCGCAC AGGGGGCCAG 
CCATGA
 
Protein sequence
MKRIHSLDFM QARPTPWLGW AAAGIGLIVL AAVALPLLPL VQDNQMRADA LRTISRQTQE 
DSAQVIVQSP AERRRQAQSR RLLQQLDAPW NELFALLEQH ADPQVGLLRI EPDAGSGQIR 
LMAMCKDLGV MATWLRRLEQ DPRLSDVQIV QHQIEELAPG RPVRFNLVAR WRGAPAGGKV 
AAARQTADPV GAGLSRTGGQ P