| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2608 |
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| Symbol | |
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| ID | 6162897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2859085 |
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| End bp | 2861586 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665384 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_001791638 |
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| Protein GI | 171059289 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGCCC TTTGTGGCGG CTTGCTGGGC ACCGCGCTGC AGCTGCGCCA GCCTGACGTG
GCGTCGCTGC CGGCGCTGAT CGGCGTGTCG CTCGCGGCGC TGGTGTTCGG GGGTCTGCTC
GCCTGGCCGC AGCGGGTCGT GCGGGGTCGC TGGCGCTTCG GGCTGGCCCT GGTCGGCGCC
GCGGGGCTGG CATTTGCGGC GACCAGCTGG CGAGCCCAGC AGCGCCTTGA CGAGCAGCTG
TCGGCCGCGC TCGAGGGGGT CGACCTGCAG ATCGAAGGGG TGGTCGCCAG CCTGCCGACC
TGGCGCGGCG ACGGCGTGCG GTTCGTGTTC GAGCTGGAGT CCGCGACGGT GGACGGCGAG
CCGCTGGCGC CGGGTCGTGC GGTGCCGCGG CGCGTGTCGC TGGGCTGGTA TCACGGTTTC
CAGGATTCGG CCGTCGGCTC CTGGCCGCCG TCCGACATCG GCGCCGGGCA GCGCTGGCGC
TGGACGGTGC GGCTGCGCCG GCCGCATGGC AACCTCAATC CGCACGGCTT CGACTCCGAG
CTCTGGATGT TCGAGCAGGG ACTGCGTGCC GGCGGCAGCG TGCGTCCGCT CGTGGCGGAT
CGGCCCGTGC GCCTGGCGGA TGCGGGTGGC CACACCGTGC AGCGCTGGCG TCAGCAGGTG
CGTTCAGCCA TCGTGGCGCG GCTGGGCCAC ACGCCCGCTG CGGGCATCCT GGCCGGCCTG
GCGGTCGGCG ACCAGGCGGC CATCGATCGC GCCGACTGGG CGGTCTTCCG CACCACCGGG
GTGGCACATC TGCTTGCGGT CAGCGGCCTG CACATCACCT TGTTCGCCTG GATGGCCTCG
GCCGTGGTGG CGATGGCGTG GCGCCGCAGC CGTGCCTGTG CGTTGCGCTG GCCGACGCCG
CAGGCGGCGC GCTGGGGCGG CTTGCTGGCC GCTGCGGCCT ATGCGCTGCT GGCCGGCTGG
GGCGTGCCGG CGCAGCGCAC GGTCTACATG CTGGCGGTGC TGACCCTGTT GCGAAGTGCC
GGCCTGCAGT GGCCCGCGCC GGTGGTCCTG CTGACCTGTG CCGCGGCGGT GGTGCTGCTC
GATCCATGGG CCTTGCTGCA GCCGGGCTTC TGGCTGTCGT TTGTTGCGGT CGCCTTGCTC
GGCGGATCGA CCCCGGCCAG CGCGGGCGCC GAGCGGCCGC AGGGTTTCGT CGCCACTGCC
CGCGCCGCGC TGCATGCCGG ATGGCGCAGC CAATGGGTCG CCAGCATCGG ACTGGCGCCC
TGGACGCTGA TCTTCTTCAA CCAGGTGTCG GCGGTCGGCC TGCTGGCCAA TTCTTTGGCG
ATCCCGCTCG TCACGCTGCT CATCACGCCG CTGGCCTTGC TCGGCGTGCT GATGCCGCCT
TGCTGGTCGC TGGCGGCCGG GCTGATCGAG TCGATGATGG TCGCGCTGCA GTGGCTGGCC
GGCTGGCCCG GCGCCAGCTG GCAGGTGCCT GCTGCGCCGG CCTGGGCCCA GTGCCTCGGC
GCTGCCGGCG CCGCCTTGCT GATCCTGCCC TGGCCGGTGG CCGTCCGGCT GCTGGGCGGG
GCGTTCCTGT TGCCGATGCT CTGGCCGCTG GTGCCGCGGC CGCCAGCGGG GGATTTCGAT
CTGCTCGGCG TCGACGTCGG TCAGGGCAAC GCGGTGCTGG TGCGCACGGC CCGGCACACG
CTGCTGTACG ACGCCGGGCC GCTGTACGGC CGCGAAAGCG ATGCCGGCGA GCGGGTGCTG
GTGCCGCTGC TGGCCGCGCT CGGCGAGCGG CGCCTCGATC TGCTGATGCT GTCGCACCGC
GATGCCGACC ACACCGGCGG CGCGGCTGCC GTGCTGGCGG GGCCGGGCGC CGTGCGGGTC
ATGAGTTCGC TCGAACCGGG CCATGTTTTG CGCGCCCTGG CGCCGCATCA GCCCTGCGTG
GCCGGGCAAC GCTGGCGCTG GGATGGCGTC GAGTTGCAGG TGCTGCACCC CACCGCCGCC
GACTATCGGC TCGCGCGTGC CGGCGGCCTG CGACCCAACG GGCTGTCGTG CGTGTTGCGC
ATCAGCAATG GCCGGCGCAC CGTCTTGCTG ACCGGCGACA TCGAGCGCCA GCAGGAGCTC
GCGATCCTGG CCCGCCACGG CCAGGATGCG GGCCTGACCG AAGAAGCGTT GGCGCTGGCT
CACGGACTGA GCCTGCAAGC CGATGTTTTG TTGGTGCCGC ACCACGGCAG TCGCACCTCT
TCGACGCAGA ATTGGCTCGA GGCCGTCCGT CCGACGTGGG CGTTGGTTCA AGCGGGCCAT
CGCAACCGCT ACGGGCATCC AGCCGCTGAC GTCATCGAAC GTTATCGGCT GCACGCTGTT
GGTGTCATTC GCACGAATTC GTGCGGCGCG TGGCACTGGC AGAGTGCGGA TGCTGCGCAC
TGGTGCGAAC GACGGCGGCA TCGACGGTAT TGGCATGCCC CGCCAGAGGG CGATGGCCTT
GATATTGCTA ATGACACTGG GCCCAGCGAC GTATCACCAT GA
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| Protein sequence | MGALCGGLLG TALQLRQPDV ASLPALIGVS LAALVFGGLL AWPQRVVRGR WRFGLALVGA
AGLAFAATSW RAQQRLDEQL SAALEGVDLQ IEGVVASLPT WRGDGVRFVF ELESATVDGE
PLAPGRAVPR RVSLGWYHGF QDSAVGSWPP SDIGAGQRWR WTVRLRRPHG NLNPHGFDSE
LWMFEQGLRA GGSVRPLVAD RPVRLADAGG HTVQRWRQQV RSAIVARLGH TPAAGILAGL
AVGDQAAIDR ADWAVFRTTG VAHLLAVSGL HITLFAWMAS AVVAMAWRRS RACALRWPTP
QAARWGGLLA AAAYALLAGW GVPAQRTVYM LAVLTLLRSA GLQWPAPVVL LTCAAAVVLL
DPWALLQPGF WLSFVAVALL GGSTPASAGA ERPQGFVATA RAALHAGWRS QWVASIGLAP
WTLIFFNQVS AVGLLANSLA IPLVTLLITP LALLGVLMPP CWSLAAGLIE SMMVALQWLA
GWPGASWQVP AAPAWAQCLG AAGAALLILP WPVAVRLLGG AFLLPMLWPL VPRPPAGDFD
LLGVDVGQGN AVLVRTARHT LLYDAGPLYG RESDAGERVL VPLLAALGER RLDLLMLSHR
DADHTGGAAA VLAGPGAVRV MSSLEPGHVL RALAPHQPCV AGQRWRWDGV ELQVLHPTAA
DYRLARAGGL RPNGLSCVLR ISNGRRTVLL TGDIERQQEL AILARHGQDA GLTEEALALA
HGLSLQADVL LVPHHGSRTS STQNWLEAVR PTWALVQAGH RNRYGHPAAD VIERYRLHAV
GVIRTNSCGA WHWQSADAAH WCERRRHRRY WHAPPEGDGL DIANDTGPSD VSP
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